RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 NICN1Q9BSH3 213 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 WDR12Q9GZL7 423 aaKnown RBP7.41□□□□□ -1.22
SF3A1-206ENST00000471037 IFT22Q9H7X7 185 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 SPACA1Q9HBV2 294 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 NLKQ9UBE8 527 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 DNAJB11Q9UBS4 358 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 FAM96BQ9Y3D0 163 aa7.41□□□□□ -1.22
SF3A1-206ENST00000471037 A0A0A6YYD4 124 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 FOXI3A8MTJ6 420 aaPredicted RBP7.4□□□□□ -1.22
SF3A1-206ENST00000471037 SH2D1BO14796 132 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 GEMIN2O14893 280 aaKnown RBP7.4□□□□□ -1.22
SF3A1-206ENST00000471037 PDCD6O75340 191 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 OR7C1O76099 320 aaPredicted RBP7.4□□□□□ -1.22
SF3A1-206ENST00000471037 GLAP06280 429 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 GSTP1P09211 210 aaKnown RBP7.4□□□□□ -1.22
SF3A1-206ENST00000471037 CSF1P09603 554 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 GABRR1P24046 479 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 BLVRBP30043 206 aaPredicted RBP7.4□□□□□ -1.22
SF3A1-206ENST00000471037 SNU13P55769 128 aaKnown RBP7.4□□□□□ -1.22
SF3A1-206ENST00000471037 TAS2R20P59543 309 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 GMFBP60983 142 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 MRPS10P82664 201 aaKnown RBP7.4□□□□□ -1.22
SF3A1-206ENST00000471037 PITPNAQ00169 270 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 GUCA2AQ02747 115 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 IKZF1Q13422 519 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 IL18Q14116 193 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 ZNF846Q147U1 533 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 MICBQ29980 383 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 SAMD5Q5TGI4 173 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 FAM131AQ6UXB0 335 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 SLC36A1Q7Z2H8 476 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 MFSD4AQ8N468 514 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 CHST4Q8NCG5 386 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 OR5R1Q8NH85 324 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 C8orf46Q8TAG6 207 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 RAB3CQ96E17 227 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 SOSTQ9BQB4 213 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 WDR13Q9H1Z4 485 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.4□□□□□ -1.22
SF3A1-206ENST00000471037 RCC2Q9P258 522 aaKnown RBP7.4□□□□□ -1.22
SF3A1-206ENST00000471037 IL36RNQ9UBH0 155 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 HSF4Q9ULV5 492 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 V9GYH0 126 aa7.4□□□□□ -1.22
SF3A1-206ENST00000471037 TRAV18A0A075B6X5 111 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 IGHV3OR15-7A0A075B7D8 119 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 A0A1B0GW55 424 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 RFPL4AA6NLU0 287 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 OR2AT4A6NND4 320 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 SERPINE3A8MV23 424 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 RFPL4AL1F8VTS6 287 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 RNASEK-C17orf49H0YIS7 233 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 MFNGO00587 321 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 DEGS1O15121 323 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 CTDSPLO15194 276 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 SOCS1O15524 211 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 CA11O75493 328 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 HAND1O96004 215 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 OPN1MWP04001 364 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 DUX4L2P0CJ85 424 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 DUX4L3P0CJ86 424 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 DUX4L4P0CJ87 422 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 DUX4L5P0CJ88 424 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 DUX4L6P0CJ89 424 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 DUX4L7P0CJ90 424 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 OPN1MW2P0DN77 364 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 OPN1MW3P0DN78 364 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 PSG2P11465 335 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 ZNF44P15621 663 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 HIST1H1DP16402 221 aaKnown RBP7.39□□□□□ -1.23
SF3A1-206ENST00000471037 FUT3P21217 361 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 LMO1P25800 156 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 CHATP28329 748 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 CD40LGP29965 261 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 TMEM50BP56557 158 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 PNLIPRP3Q17RR3 467 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 MOGAT2Q3SYC2 334 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 STUMQ69YW2 141 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 HIST2H2BDQ6DRA6 164 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 SIGIRRQ6IA17 410 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 SLC35E4Q6ICL7 350 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 Q6P435 159 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 DUX4L9Q6RFH8 374 aaPredicted RBP7.39□□□□□ -1.23
SF3A1-206ENST00000471037 Q6ZTK2 550 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 FGFRL1Q8N441 504 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 Q8N7P7 452 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 TNFRSF14Q92956 283 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 CCL13Q99616 98 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 DCTN5Q9BTE1 182 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 DNTTIP1Q9H147 329 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 AUNIPQ9H7T9 357 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 SIRT7Q9NRC8 400 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 PLEKHJ1Q9NW61 149 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 ONECUT1Q9UBC0 465 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 DUX4Q9UBX2 424 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 OR14J1Q9UGF5 321 aa7.39□□□□□ -1.23
SF3A1-206ENST00000471037 MRPS7Q9Y2R9 242 aaKnown RBP7.39□□□□□ -1.23
SF3A1-206ENST00000471037 IGKV1D-17A0A075B6S4 117 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 NKX6-3A6NJ46 265 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 G3V4G9 280 aa7.38□□□□□ -1.23
SF3A1-206ENST00000471037 SULT1C2O00338 296 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms