RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 OR6C3Q9NZP0 311 aa12.59□□□□□ -0.39
COL4A5-203ENST00000470339 A0A1B0GVG6 124 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 NPIPB11E5RHQ5 1161 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 SDCBPO00560 298 aaPredicted RBP12.58□□□□□ -0.4
COL4A5-203ENST00000470339 ADAM20O43506 726 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 NDUFB3O43676 98 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 DHFRP00374 187 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 SCTP09683 121 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 PAX1P15863 534 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 SSTR2P30874 369 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 GLP1RP43220 463 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 LRRC10Q5BKY1 277 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 FAM216BQ8N7L0 139 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 OR13C8Q8NGS7 320 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 CORO2AQ92828 525 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 PSMG3-AS1Q96PY0 264 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 ALX4Q9H161 411 aaPredicted RBP12.58□□□□□ -0.4
COL4A5-203ENST00000470339 TAF9BQ9HBM6 251 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 RAB9BQ9NP90 201 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 SLC25A10Q9UBX3 287 aaPredicted RBP12.58□□□□□ -0.4
COL4A5-203ENST00000470339 LPAR3Q9UBY5 353 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 USF3Q68DE3 2245 aa12.58□□□□□ -0.4
COL4A5-203ENST00000470339 CRYBG3Q68DQ2 2970 aa12.57□□□□□ -0.4
COL4A5-203ENST00000470339 TRAV6A0A075B6T7 132 aa12.57□□□□□ -0.4
COL4A5-203ENST00000470339 TRBV6-7A0A0A0MS04 114 aa12.57□□□□□ -0.4
COL4A5-203ENST00000470339 GPR37O15354 613 aa12.57□□□□□ -0.4
COL4A5-203ENST00000470339 PPIHO43447 177 aaKnown RBP12.57□□□□□ -0.4
COL4A5-203ENST00000470339 PEX14O75381 377 aa12.57□□□□□ -0.4
COL4A5-203ENST00000470339 SEC61A1P61619 476 aaKnown RBP12.57□□□□□ -0.4
COL4A5-203ENST00000470339 MEF2CQ06413 473 aaPredicted RBP12.57□□□□□ -0.4
COL4A5-203ENST00000470339 EDDM3AQ14507 147 aa12.57□□□□□ -0.4
COL4A5-203ENST00000470339 SURF2Q15527 256 aaPredicted RBP12.57□□□□□ -0.4
COL4A5-203ENST00000470339 IGSF11Q5DX21 431 aa12.57□□□□□ -0.4
COL4A5-203ENST00000470339 AADACL3Q5VUY0 350 aa12.57□□□□□ -0.4
COL4A5-203ENST00000470339 ING3Q9NXR8 418 aa12.57□□□□□ -0.4
COL4A5-203ENST00000470339 MIOXQ9UGB7 285 aa12.57□□□□□ -0.4
COL4A5-203ENST00000470339 IGKV1-6A0A0C4DH72 117 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 C12orf77C9JDV5 145 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 SPINT2O43291 252 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 PRAF2O60831 178 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 LY6HO94772 140 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 CGB3P0DN86 165 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 CGB7P0DN87 165 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 SELLP14151 372 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 FCGR2CP31995 323 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 UCP3P55916 312 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 HERPUD1Q15011 391 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 LYPD2Q6UXB3 125 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 SPICQ8N5J4 248 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 OR10J5Q8NHC4 309 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 MRGPRFQ96AM1 343 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 GALMQ96C23 342 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 ZNF2Q9BSG1 426 aaPredicted RBP12.56□□□□□ -0.4
COL4A5-203ENST00000470339 LINC00574Q9H8X3 128 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 BARX1Q9HBU1 254 aaPredicted RBP12.56□□□□□ -0.4
COL4A5-203ENST00000470339 SLC23A1Q9UHI7 598 aa12.56□□□□□ -0.4
COL4A5-203ENST00000470339 AKAP6Q13023 2319 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 TRGV10A0A0A0MS01 117 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 A0A1B0GW55 424 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 hADV38S2A0JD32 116 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 DVL1O14640 695 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 ARPC1BO15143 372 aaKnown RBP12.55□□□□□ -0.4
COL4A5-203ENST00000470339 TUSC2O75896 110 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 IL5P05113 134 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 HEXAP06865 529 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 DUX4L2P0CJ85 424 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 DUX4L3P0CJ86 424 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 DUX4L4P0CJ87 422 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 DUX4L5P0CJ88 424 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 DUX4L6P0CJ89 424 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 DUX4L7P0CJ90 424 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 NDUFB7P17568 137 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 FPR2P25090 351 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 EDDM3BP56851 147 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 HTD2P86397 168 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 TATDN3Q17R31 274 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 C11orf91Q3C1V1 193 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 TMEM30BQ3MIR4 351 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 DUX4L9Q6RFH8 374 aaPredicted RBP12.55□□□□□ -0.4
COL4A5-203ENST00000470339 OR13A1Q8NGR1 328 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 MOB3AQ96BX8 217 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 KIRREL1Q96J84 757 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 TOLLIPQ9H0E2 274 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 DUX4Q9UBX2 424 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 GPR132Q9UNW8 380 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 UBE2J1Q9Y385 318 aaPredicted RBP12.55□□□□□ -0.4
COL4A5-203ENST00000470339 TACC2O95359 2948 aa12.55□□□□□ -0.4
COL4A5-203ENST00000470339 DOPEY2Q9Y3R5 2298 aa12.54□□□□□ -0.4
COL4A5-203ENST00000470339 TRAV39A0A0B4J263 110 aa12.54□□□□□ -0.4
COL4A5-203ENST00000470339 C7orf66A4D0T2 115 aa12.54□□□□□ -0.4
COL4A5-203ENST00000470339 OR5H14A6NHG9 310 aa12.54□□□□□ -0.4
COL4A5-203ENST00000470339 ZNF729A6NN14 1252 aaPredicted RBP12.54□□□□□ -0.4
COL4A5-203ENST00000470339 C15orf65H3BRN8 121 aa12.54□□□□□ -0.4
COL4A5-203ENST00000470339 BET1O15155 118 aa12.54□□□□□ -0.4
COL4A5-203ENST00000470339 NDUFS7O75251 213 aa12.54□□□□□ -0.4
COL4A5-203ENST00000470339 IGHV4-39P01824 125 aa12.54□□□□□ -0.4
COL4A5-203ENST00000470339 HBZP02008 142 aa12.54□□□□□ -0.4
COL4A5-203ENST00000470339 WNT2P09544 360 aa12.54□□□□□ -0.4
COL4A5-203ENST00000470339 ZBTB25P24278 435 aa12.54□□□□□ -0.4
COL4A5-203ENST00000470339 IL2RGP31785 369 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms