RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 TM2D1Q9BX74 207 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 TMEM59Q9BXS4 323 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 CST11Q9H112 138 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 ABCG5Q9H222 651 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 BEX1Q9HBH7 125 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF222Q9UK12 451 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 RAB22AQ9UL26 194 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 KCNK7Q9Y2U2 307 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 ETV7Q9Y603 341 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 NPTNQ9Y639 398 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 USF3Q68DE3 2245 aa3.93□□□□□ -1.78
SF3B1-208ENST00000470268 APCP25054 2843 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 SVEP1Q4LDE5 3571 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 TRAV6A0A075B6T7 132 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 PPIAL4EA0A075B759 164 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 TRAV24A0A0B4J272 114 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 OOEPA6NGQ2 149 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 OR2AT4A6NND4 320 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 PPIAL4DF5H284 164 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 J3KRW8 73 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 LYRM1O43325 122 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 OR2H2O95918 312 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 CYB5AP00167 134 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 IGHV2-70P01814 119 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 APOA1P02647 267 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 GYPAP02724 150 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 PPIAL4FP0DN26 164 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 GABRR1P24046 479 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 TALDO1P37837 337 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 NR4A2P43354 598 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 ART1P52961 327 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 ATP5J2P56134 94 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 DEFA1P59665 94 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 DEFA3P59666 94 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 BTG1P62324 171 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 MRPS11P82912 194 aaKnown RBP3.92□□□□□ -1.78
SF3B1-208ENST00000470268 UBE2NLQ5JXB2 153 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 AVPI1Q5T686 147 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 RSBN1Q5VWQ0 802 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-208ENST00000470268 STUMQ69YW2 141 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 LYPD2Q6UXB3 125 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 DNM1P46Q6ZS02 220 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 C6orf201Q7Z4U5 140 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 Q8IYB0 196 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 OR11L1Q8NGX0 322 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 PTX4Q96A99 478 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 MRPS24Q96EL2 167 aaKnown RBP3.92□□□□□ -1.78
SF3B1-208ENST00000470268 LURAP1Q96LR2 239 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 TMEM246Q9BRR3 403 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 SHARPINQ9H0F6 387 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 ATG5Q9H1Y0 275 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 CHODLQ9H9P2 273 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 CTSZQ9UBR2 303 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 DKK2Q9UBU2 259 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 OR14J1Q9UGF5 321 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 WIPI2Q9Y4P8 454 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 PPIAL4AQ9Y536 164 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 MAB21L2Q9Y586 359 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 AKAP6Q13023 2319 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 PTPN13Q12923 2485 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 CENPEQ02224 2701 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 DSCAMO60469 2012 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 HECTD1Q9ULT8 2610 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 CHD3Q12873 2000 aaKnown RBP3.92□□□□□ -1.78
SF3B1-208ENST00000470268 LRRC30A6NM36 301 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 SMLR1H3BR10 107 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 LGALS8O00214 317 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 SIRPB1O00241 398 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 SLC33A1O00400 549 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-208ENST00000470268 HSPB6O14558 160 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 TRIAP1O43715 76 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 ORC5O43913 435 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF737O75373 536 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 OR7C1O76099 320 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-208ENST00000470268 HAND1O96004 215 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 SLPIP03973 132 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 IRF2P14316 349 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 MUC1P15941 1255 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-208ENST00000470268 GNB3P16520 340 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 CPT2P23786 658 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 LMO1P25800 156 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 GIFP27352 417 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 CHATP28329 748 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 BLVRBP30043 206 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-208ENST00000470268 PRDX2P32119 198 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 TMEM33P57088 247 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 TAS2R20P59543 309 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 IFITM2Q01629 132 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 MICBQ29980 383 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 DEFB113Q30KQ7 82 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 SMIM21Q3B7S5 101 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 SPIN3Q5JUX0 258 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 Q6ZPA2 131 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF788Q6ZQV5 615 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 C17orf107Q6ZR85 190 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 C1orf87Q8N0U7 546 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 BPIFB2Q8N4F0 458 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 FAM216BQ8N7L0 139 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 MINDY2Q8NBR6 621 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 ZNRF1Q8ND25 227 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms