RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 hCG_38984A0A1B0GV85 526 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 A0A1B0GVG6 124 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 RPS4Y1P22090 263 aaKnown RBP6.15□□□□□ -1.43
CD46-212ENST00000469535 DYNLT3P51808 116 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 SPCS3P61009 180 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 HLA-DRB3P79483 266 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 PLPPR5Q32ZL2 321 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 SMUG1Q53HV7 270 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 BVESQ8NE79 360 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 OR5A2Q8NGI9 324 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 SOSTQ9BQB4 213 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 TECRQ9NZ01 308 aaKnown RBP6.15□□□□□ -1.43
CD46-212ENST00000469535 TEX50A0A1B0GTY4 177 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 A0A1W2PNV4 684 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 CDC42EP2O14613 210 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 SFT2D2O95562 160 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 TGFAP01135 160 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 THY1P04216 161 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 SSBP1Q04837 148 aaKnown RBP6.15□□□□□ -1.43
CD46-212ENST00000469535 INPP5JQ15735 1006 aaPredicted RBP6.15□□□□□ -1.43
CD46-212ENST00000469535 ANKRD55Q3KP44 614 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 FAM106AQ4KMX7 169 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 SEZ6L2Q6UXD5 910 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 BAP18Q8IXM2 172 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 DTD1Q8TEA8 209 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 WDR34Q96EX3 536 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 NXF2Q9GZY0 626 aaKnown RBP6.15□□□□□ -1.43
CD46-212ENST00000469535 DPH3P1Q9H4G8 78 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 ZDHHC8Q9ULC8 765 aa6.15□□□□□ -1.43
CD46-212ENST00000469535 IGHV1-69-2A0A0G2JMI3 117 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 SOCS1O15524 211 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 USF1P22415 310 aaPredicted RBP6.14□□□□□ -1.43
CD46-212ENST00000469535 HCP5Q6MZN7 132 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 TMEM88Q6PEY1 159 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 PRNTQ86SH4 94 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 ZNF418Q8TF45 676 aaPredicted RBP6.14□□□□□ -1.43
CD46-212ENST00000469535 FAM168AQ92567 244 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 HIGD1AQ9Y241 93 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 LRP5O75197 1615 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 LAMA4Q16363 1823 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 A0A1W2PS18 150 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 LEUTXA8MZ59 168 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 TMEM262E9PQX1 116 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 J3QR06 171 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 ADAM11O75078 769 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 TCL1AP56279 114 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 POLR2GP62487 172 aaKnown RBP eCLIP6.14□□□□□ -1.43
CD46-212ENST00000469535 ZNF770Q6IQ21 691 aaPredicted RBP6.14□□□□□ -1.43
CD46-212ENST00000469535 PCSK4Q6UW60 755 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 ZNF429Q86V71 674 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 OR4A5Q8NH83 315 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 SNRNP40Q96DI7 357 aaKnown RBP6.14□□□□□ -1.43
CD46-212ENST00000469535 TLNRD1Q9H1K6 362 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 SCN3AQ9NY46 2000 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 A0A1B0GU03 582 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 TBX19O60806 448 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 CTAG2O75638 210 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 ATP5G2Q06055 141 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 ZBTB44Q8NCP5 570 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 SFXN3Q9BWM7 321 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 SRD5A3Q9H8P0 318 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 PLXNB2O15031 1838 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 A0A1W2PPV9 198 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 TRIM77I1YAP6 450 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 RAB29O14966 203 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 FOXH1O75593 365 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 JUNBP17275 347 aaPredicted RBP6.14□□□□□ -1.43
CD46-212ENST00000469535 CSF2RBP32927 897 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 MMP15P51511 669 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 GABRA6Q16445 453 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 MIDNQ504T8 468 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.14□□□□□ -1.43
CD46-212ENST00000469535 OR1K1Q8NGR3 316 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 CROCCQ5TZA2 2017 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 A0A0B4J293 547 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 WNT9BO14905 357 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 CD160O95971 181 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 CPN1P15169 458 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 COL8A1P27658 744 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 PPP1R1AQ13522 171 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 ACSF3Q4G176 576 aaPredicted RBP6.14□□□□□ -1.43
CD46-212ENST00000469535 TMEM105Q8N8V8 129 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 MRM2Q9UI43 246 aaKnown RBP6.14□□□□□ -1.43
CD46-212ENST00000469535 P01737 135 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 BGLAPP02818 100 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 SULT1A1P50225 295 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 ASAH1Q13510 395 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 MRGPRFQ96AM1 343 aa6.14□□□□□ -1.43
CD46-212ENST00000469535 TMEFF2Q9UIK5 374 aaPredicted RBP6.14□□□□□ -1.43
CD46-212ENST00000469535 RNASE1P07998 156 aaKnown RBP6.13□□□□□ -1.43
CD46-212ENST00000469535 C1orf174Q8IYL3 243 aa6.13□□□□□ -1.43
CD46-212ENST00000469535 EIF4E3Q8N5X7 224 aaKnown RBP6.13□□□□□ -1.43
CD46-212ENST00000469535 COMMD1Q8N668 190 aa6.13□□□□□ -1.43
CD46-212ENST00000469535 TRIP12Q14669 1992 aaPredicted RBP6.13□□□□□ -1.43
CD46-212ENST00000469535 TRIP11Q15643 1979 aa6.13□□□□□ -1.43
CD46-212ENST00000469535 RPL27AP46776 148 aaKnown RBP6.13□□□□□ -1.43
CD46-212ENST00000469535 Q6ZN92 141 aa6.13□□□□□ -1.43
CD46-212ENST00000469535 FAM210BQ96KR6 192 aa6.13□□□□□ -1.43
CD46-212ENST00000469535 BCL2L11O43521 198 aa6.13□□□□□ -1.43
CD46-212ENST00000469535 PSG4Q00888 419 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms