RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 C8orf4Q9NR00 106 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 LIN7CQ9NUP9 197 aaKnown RBP9.6□□□□□ -0.87
COL5A1-207ENST00000469093 IMPAD1Q9NX62 359 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 ZNF581Q9P0T4 197 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 AASSQ9UDR5 926 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 SORL1Q92673 2214 aa9.6□□□□□ -0.87
COL5A1-207ENST00000469093 E9PI62 339 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 GABRPO00591 440 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 MPZL2O60487 215 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 ELANEP08246 267 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 ECI1P42126 302 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 FOXE3Q13461 319 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 GALEQ14376 348 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 CXorf66Q5JRM2 361 aaPredicted RBP9.59□□□□□ -0.87
COL5A1-207ENST00000469093 C9orf66Q5T8R8 295 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 LPCAT4Q643R3 524 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 FAM53AQ6NSI3 398 aaPredicted RBP9.59□□□□□ -0.87
COL5A1-207ENST00000469093 ZNF529Q6P280 563 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 SATL1Q86VE3 508 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 IZUMO1Q8IYV9 350 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 SUMF2Q8NBJ7 301 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 OR51A2Q8NGJ7 313 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 OR5M8Q8NGP6 311 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 OR8U1Q8NH10 309 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 TNFAIP8L1Q8WVP5 186 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 ST6GALNAC6Q969X2 333 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 LGALS12Q96DT0 336 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 ASCL2Q99929 193 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 ALG8Q9BVK2 526 aa9.59□□□□□ -0.87
COL5A1-207ENST00000469093 DPCDQ9BVM2 203 aaPredicted RBP9.59□□□□□ -0.87
COL5A1-207ENST00000469093 TMEM212A6NML5 194 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 ZNF736B4DX44 427 aaPredicted RBP9.58□□□□□ -0.88
COL5A1-207ENST00000469093 SEC14L6B5MCN3 397 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 C15orf65H3BRN8 121 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 HTR3BO95264 441 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 RPSAP08865 295 aaKnown RBP9.58□□□□□ -0.88
COL5A1-207ENST00000469093 RAB3AP20336 220 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 CFHR3Q02985 330 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 RIPK1Q13546 671 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 RSU1Q15404 277 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 SYS1Q8N2H4 156 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 CBR4Q8N4T8 237 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 LINC00311Q8N616 119 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 TMEM104Q8NE00 496 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 OR52M1Q8NGK5 317 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 OR5AK2Q8NH90 309 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 RBMXL1Q96E39 390 aaKnown RBP9.58□□□□□ -0.88
COL5A1-207ENST00000469093 S1PR3Q99500 378 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 GPER1Q99527 375 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 FAM118AQ9NWS6 357 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 DHDHQ9UQ10 334 aa9.58□□□□□ -0.88
COL5A1-207ENST00000469093 SNTNA6NMZ2 147 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 C3orf84H3BNL1 204 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 SDCBPO00560 298 aaPredicted RBP9.57□□□□□ -0.88
COL5A1-207ENST00000469093 EI24O14681 340 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 MAGEB3O15480 346 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 CDRT1O95170 752 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 ATP6V1G2O95670 118 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 MOSP00540 346 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 IGHG4P01861 327 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 ALPLP05186 524 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 GABRB1P18505 474 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 CD1BP29016 333 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 ALDH3A2P51648 485 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 ZIK1Q3SY52 487 aaPredicted RBP9.57□□□□□ -0.88
COL5A1-207ENST00000469093 C8orf31Q8N9H6 132 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 UBALD1Q8TB05 177 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 TSEN15Q8WW01 171 aaKnown RBP9.57□□□□□ -0.88
COL5A1-207ENST00000469093 RTN4IP1Q8WWV3 396 aaPredicted RBP9.57□□□□□ -0.88
COL5A1-207ENST00000469093 ARL11Q969Q4 196 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 CPNE2Q96FN4 548 aaPredicted RBP9.57□□□□□ -0.88
COL5A1-207ENST00000469093 MRPL48Q96GC5 212 aaKnown RBP9.57□□□□□ -0.88
COL5A1-207ENST00000469093 MYCBPQ99417 103 aaPredicted RBP9.57□□□□□ -0.88
COL5A1-207ENST00000469093 RASL11BQ9BPW5 248 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 HSPB9Q9BQS6 159 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 FAM192AQ9GZU8 254 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 IFT22Q9H7X7 185 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 GFOD1Q9NXC2 390 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 ST3GAL6Q9Y274 331 aa9.57□□□□□ -0.88
COL5A1-207ENST00000469093 TMEM30CPA0ZSE6 113 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 GEMIN2O14893 280 aaKnown RBP9.56□□□□□ -0.88
COL5A1-207ENST00000469093 ORC5O43913 435 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 OR7C1O76099 320 aaPredicted RBP9.56□□□□□ -0.88
COL5A1-207ENST00000469093 MT-ND4P03905 459 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 PSMB8P28062 276 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 VHLP40337 213 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 SOX2P48431 317 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 GTF2A1P52655 376 aaPredicted RBP9.56□□□□□ -0.88
COL5A1-207ENST00000469093 F2RL1P55085 397 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 MRPL28Q13084 256 aaKnown RBP9.56□□□□□ -0.88
COL5A1-207ENST00000469093 FHL3Q13643 280 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 LRRC36Q1X8D7 754 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 ZNF260Q3ZCT1 412 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 NHLRC3Q5JS37 347 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 FAM71E2Q8N5Q1 922 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 PACRGLQ8N7B6 248 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 OR8H1Q8NGG4 311 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 OR52N1Q8NH53 320 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 CCDC107Q8WV48 283 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 C4orf3Q8WVX3 66 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms