RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 HOXB13Q92826 284 aaPredicted RBP10.72□□□□□ -0.69
USP11-206ENST00000469080 ARHGAP5-AS1Q96IT6 56 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 SIGLEC12Q96PQ1 595 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 GPHA2Q96T91 129 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 B3GAT1Q9P2W7 334 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 SLC7A11Q9UPY5 501 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 XKRY2A2RUG3 117 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 IFNL4K9M1U5 179 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 TNFSF12O43508 249 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 TRAF3IP2O43734 574 aaPredicted RBP10.72□□□□□ -0.69
USP11-206ENST00000469080 MSR1P21757 451 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 LDLRAD2Q5SZI1 272 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 C6orf201Q7Z4U5 140 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 BIVMQ86UB2 503 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 PAQR4Q8N4S7 273 aaPredicted RBP10.72□□□□□ -0.69
USP11-206ENST00000469080 CDC6Q99741 560 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 SYT3Q9BQG1 590 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 TAS2R8Q9NYW2 309 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 POMT1Q9Y6A1 747 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 PINLYPA6NC86 204 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 A6NJY4 79 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 H7C417 338 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 NPIPB7O75200 414 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 CD37P11049 281 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 HLA-GP17693 338 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 SUCLG1P53597 346 aaKnown RBP10.72□□□□□ -0.69
USP11-206ENST00000469080 FOXG1P55316 489 aaPredicted RBP10.72□□□□□ -0.69
USP11-206ENST00000469080 EXT1Q16394 746 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 C1QL2Q7Z5L3 287 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 LHFPL4Q7Z7J7 247 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 EXD3Q8N9H8 876 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 OR9K2Q8NGE7 335 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 ZNF442Q9H7R0 627 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 FKBP11Q9NYL4 201 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 MTFP1Q9UDX5 166 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 RAB22AQ9UL26 194 aa10.72□□□□□ -0.69
USP11-206ENST00000469080 F6UZH7 168 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 WNT5AP41221 380 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 ELLP55199 621 aaPredicted RBP10.71□□□□□ -0.69
USP11-206ENST00000469080 SPIN3Q5JUX0 258 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 C1orf194Q5T5A4 169 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 ZNF441Q8N8Z8 693 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 TECTBQ96PL2 329 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 PHB2Q99623 299 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 PBDC1Q9BVG4 233 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 EHFQ9NZC4 300 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 INTS1Q8N201 2190 aaKnown RBP10.71□□□□□ -0.69
USP11-206ENST00000469080 GOSR1O95249 250 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 CEACAM1P13688 526 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 PLCXD3Q63HM9 321 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 OR10S1Q8NGN2 331 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 OR1P1Q8NH06 330 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 OR4K15Q8NH41 348 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 BORCS8Q96FH0 119 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 TBX15Q96SF7 602 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 PARP11Q9NR21 331 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 DEPPQ9NTK1 212 aa10.71□□□□□ -0.69
USP11-206ENST00000469080 NXT1Q9UKK6 140 aaKnown RBP10.71□□□□□ -0.69
USP11-206ENST00000469080 DOCK11Q5JSL3 2073 aa10.71□□□□□ -0.7
USP11-206ENST00000469080 TRAV39A0A0B4J263 110 aa10.71□□□□□ -0.7
USP11-206ENST00000469080 A0A1B0GTI1 187 aa10.71□□□□□ -0.7
USP11-206ENST00000469080 C5orf49A4QMS7 147 aa10.71□□□□□ -0.7
USP11-206ENST00000469080 H3BQ15 152 aa10.71□□□□□ -0.7
USP11-206ENST00000469080 RAB35Q15286 201 aa10.71□□□□□ -0.7
USP11-206ENST00000469080 OR1C1Q15619 314 aa10.71□□□□□ -0.7
USP11-206ENST00000469080 SNAI3Q3KNW1 292 aa10.71□□□□□ -0.7
USP11-206ENST00000469080 MRPL14Q6P1L8 145 aaKnown RBP10.71□□□□□ -0.7
USP11-206ENST00000469080 SLC22A24Q8N4F4 322 aa10.71□□□□□ -0.7
USP11-206ENST00000469080 PAM16Q9Y3D7 125 aa10.71□□□□□ -0.7
USP11-206ENST00000469080 E9PLN8 166 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 SYNGR4O95473 234 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 MT-CO3P00414 261 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 LIFP15018 202 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 TUSC5Q8IXB3 177 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 C1orf87Q8N0U7 546 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 C17orf78Q8N4C9 275 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 GJC3Q8NFK1 279 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 WFDC12Q8WWY7 111 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 TMEM18Q96B42 140 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 SDSLQ96GA7 329 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 FZR1Q9UM11 496 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 ADGRG4Q8IZF6 3080 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 VSIG8P0DPA2 414 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 SNCAP37840 140 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 FHITP49789 147 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 SULT1A2P50226 295 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 DLK1P80370 383 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 PPP1R1AQ13522 171 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 HAGHQ16775 308 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 TMEM95Q3KNT9 176 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 ANKRD16Q6P6B7 361 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 SLC35E1Q96K37 410 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 GINS3Q9BRX5 216 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 G6PC2Q9NQR9 355 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 ABI3Q9P2A4 366 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 POLR3KQ9Y2Y1 108 aaPredicted RBP10.7□□□□□ -0.7
USP11-206ENST00000469080 MEGF11A6BM72 1044 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 H0YL77 283 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 NKX2-8O15522 239 aa10.7□□□□□ -0.7
USP11-206ENST00000469080 DSCR4P56555 118 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms