RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	ASB13	Q8WXK3	278 aa		10.3	□□□□□ -0.76
HDLBP-231	ENST00000467435	ZNF486	Q96H40	463 aa	Predicted RBP	10.3	□□□□□ -0.76
HDLBP-231	ENST00000467435	HYLS1	Q96M11	299 aa		10.3	□□□□□ -0.76
HDLBP-231	ENST00000467435	OR2A7	Q96R45	310 aa		10.3	□□□□□ -0.76
HDLBP-231	ENST00000467435	TMEM204	Q9BSN7	226 aa		10.3	□□□□□ -0.76
HDLBP-231	ENST00000467435	RSRP1	Q9BUV0	290 aa		10.3	□□□□□ -0.76
HDLBP-231	ENST00000467435	DNTTIP1	Q9H147	329 aa		10.3	□□□□□ -0.76
HDLBP-231	ENST00000467435	RANBP3	Q9H6Z4	567 aa	Predicted RBP	10.3	□□□□□ -0.76
HDLBP-231	ENST00000467435	KCNIP1	Q9NZI2	227 aa		10.3	□□□□□ -0.76
HDLBP-231	ENST00000467435	KIF25	Q9UIL4	384 aa		10.3	□□□□□ -0.76
HDLBP-231	ENST00000467435	PCDHB10	Q9UN67	800 aa		10.3	□□□□□ -0.76
HDLBP-231	ENST00000467435	ATRX	P46100	2492 aa		10.3	□□□□□ -0.76
HDLBP-231	ENST00000467435	CACNA1D	Q01668	2161 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	DSP	P15924	2871 aa	Known RBP	10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435		A0A0B4J2A0	478 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	OOEP	A6NGQ2	149 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	CRYM-AS1	A6NIL9	109 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	LRRC30	A6NM36	301 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435		G3V3Q6	166 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	CCS	O14618	274 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	IFNA2	P01563	188 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	SNRPD2	P62316	118 aa	Known RBP	10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	PAX5	Q02548	391 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	EDDM3A	Q14507	147 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	PHLDA2	Q53GA4	152 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	LY6G6F	Q5SQ64	297 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	C6orf183	Q5T699	404 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	STUM	Q69YW2	141 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	KCTD9	Q7L273	389 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	TGIF2LY	Q8IUE0	185 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	SGPP2	Q8IWX5	399 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	ZNF565	Q8N9K5	539 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	CCDC71L	Q8N9Z2	235 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	LILRB1	Q8NHL6	650 aa	Predicted RBP	10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	SECTM1	Q8WVN6	248 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	SNX22	Q96L94	193 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	CNTNAP3B	Q96NU0	1288 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	CNTNAP3	Q9BZ76	1288 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	SHARPIN	Q9H0F6	387 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	MS4A5	Q9H3V2	200 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	NAA60	Q9H7X0	242 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	TAF9B	Q9HBM6	251 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	SLC2A9	Q9NRM0	540 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	PRR13	Q9NZ81	148 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	OR1A1	Q9P1Q5	309 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	SHPK	Q9UHJ6	478 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	OPN4	Q9UHM6	478 aa		10.29	□□□□□ -0.76
HDLBP-231	ENST00000467435	IGKV1D-13	A0A0B4J2D9	117 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	NKX6-3	A6NJ46	265 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	DBX1	A6NMT0	343 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	C12orf77	C9JDV5	145 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	MGST3	O14880	152 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	IGKV1-13	P0DP09	117 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	MUC1	P15941	1255 aa	Predicted RBP	10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	GLIPR1	P48060	266 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	MST1L	Q2TV78	715 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	ANKRD55	Q3KP44	614 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	TEX36	Q5VZQ5	186 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	TRAT1	Q6PIZ9	186 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	C1orf87	Q8N0U7	546 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	MUC15	Q8N387	334 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	ZNF561	Q8N587	486 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	TPRX1	Q8N7U7	411 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	GRPEL2	Q8TAA5	225 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	UBALD1	Q8TB05	177 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	MRGPRD	Q8TDS7	321 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	WDR89	Q96FK6	387 aa	Predicted RBP	10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	PDCD10	Q9BUL8	212 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	SLC5A7	Q9GZV3	580 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	DCAF16	Q9NXF7	216 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	COL6A6	A6NMZ7	2263 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	PLCE1	Q9P212	2302 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	DSCAM	O60469	2012 aa		10.28	□□□□□ -0.76
HDLBP-231	ENST00000467435	PKD1L2	Q7Z442	2459 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435		K7N7A8	449 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	GPR31	O00270	319 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	HSPA12A	O43301	675 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	GYPA	P02724	150 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	HLA-G	P17693	338 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	SWI5	Q1ZZU3	235 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	FAM185A	Q8N0U4	392 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	ZNRF1	Q8ND25	227 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	DEFB108B	Q8NET1	73 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	OR11H4	Q8NGC9	324 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	OR13A1	Q8NGR1	328 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	OR1L1	Q8NH94	360 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	SDSL	Q96GA7	329 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	GAFA1	Q96PS6	74 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	ZNF665	Q9H7R5	613 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	PLSCR3	Q9NRY6	295 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	OR2W1	Q9Y3N9	320 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	MAB21L2	Q9Y586	359 aa		10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	MAP1B	P46821	2468 aa	Known RBP	10.27	□□□□□ -0.77
HDLBP-231	ENST00000467435	ZZEF1	O43149	2961 aa		10.26	□□□□□ -0.77
HDLBP-231	ENST00000467435	SPTA1	P02549	2419 aa		10.26	□□□□□ -0.77
HDLBP-231	ENST00000467435	DSCAML1	Q8TD84	2053 aa		10.26	□□□□□ -0.77
HDLBP-231	ENST00000467435		A0A1B0GW55	424 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms