RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 DUS4LO95620 317 aaKnown RBP13.94□□□□□ -0.18
COL7A1-206ENST00000466591 MPIG6BO95866 241 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 REG1BP48304 166 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 Q499Y3 187 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 YIF1BQ5BJH7 314 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 AWAT2Q6E213 333 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 ZNF529Q6P280 563 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 SLC35E3Q7Z769 313 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 ZNF329Q86UD4 541 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 PRR18Q8N4B5 295 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 CHPT1Q8WUD6 406 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 GHSRQ92847 366 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 RCC1LQ96I51 464 aaKnown RBP13.94□□□□□ -0.18
COL7A1-206ENST00000466591 SPACA1Q9HBV2 294 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 IL36GQ9NZH8 169 aa13.94□□□□□ -0.18
COL7A1-206ENST00000466591 NPIPB11E5RHQ5 1161 aa13.93□□□□□ -0.18
COL7A1-206ENST00000466591 MYL12BO14950 172 aa13.93□□□□□ -0.18
COL7A1-206ENST00000466591 SPINT2O43291 252 aa13.93□□□□□ -0.18
COL7A1-206ENST00000466591 TAS2R43P59537 309 aa13.93□□□□□ -0.18
COL7A1-206ENST00000466591 UTF1Q5T230 341 aa13.93□□□□□ -0.18
COL7A1-206ENST00000466591 ZFP41Q8N8Y5 198 aa13.93□□□□□ -0.18
COL7A1-206ENST00000466591 OR13C5Q8NGS8 318 aa13.93□□□□□ -0.18
COL7A1-206ENST00000466591 UBALD1Q8TB05 177 aa13.93□□□□□ -0.18
COL7A1-206ENST00000466591 ORAI1Q96D31 301 aa13.93□□□□□ -0.18
COL7A1-206ENST00000466591 C8orf4Q9NR00 106 aa13.93□□□□□ -0.18
COL7A1-206ENST00000466591 GNG12Q9UBI6 72 aa13.93□□□□□ -0.18
COL7A1-206ENST00000466591 MRPS28Q9Y2Q9 187 aaKnown RBP13.93□□□□□ -0.18
COL7A1-206ENST00000466591 IGHV3-43A0A0B4J1X8 118 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 IGHV3-72A0A0B4J1Y9 119 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 A0A1W2PPI3 338 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 A0A1W2PPK0 400 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 FGF16O43320 207 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 AMY1AP04745 511 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 AMY2AP04746 511 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 CGB3P0DN86 165 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 CGB7P0DN87 165 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 IGHV3-43DP0DP04 118 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 PAX5Q02548 391 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 DEFB121Q5J5C9 76 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 TCTEX1D4Q5JR98 221 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 NHLRC3Q5JS37 347 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 C6orf183Q5T699 404 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 C10orf99Q6UWK7 81 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 ASCL4Q6XD76 172 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 DHRSXQ8N5I4 330 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 C5orf56Q8N8D9 126 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 MUL1Q969V5 352 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 IFT22Q9H7X7 185 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 ETAA1Q9NY74 926 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 CLEC2DQ9UHP7 191 aa13.92□□□□□ -0.18
COL7A1-206ENST00000466591 OGG1O15527 345 aa13.91□□□□□ -0.18
COL7A1-206ENST00000466591 MAS1P04201 325 aa13.91□□□□□ -0.18
COL7A1-206ENST00000466591 RAB25P57735 213 aa13.91□□□□□ -0.18
COL7A1-206ENST00000466591 DIAPH2-AS1Q14236 149 aa13.91□□□□□ -0.18
COL7A1-206ENST00000466591 GLIPR1L1Q6UWM5 242 aa13.91□□□□□ -0.18
COL7A1-206ENST00000466591 Q8NFD4 153 aa13.91□□□□□ -0.18
COL7A1-206ENST00000466591 OR2T10Q8NGZ9 312 aa13.91□□□□□ -0.18
COL7A1-206ENST00000466591 NOL4LQ96MY1 436 aaPredicted RBP13.91□□□□□ -0.18
COL7A1-206ENST00000466591 OR14A2Q96R54 314 aa13.91□□□□□ -0.18
COL7A1-206ENST00000466591 GON7Q9BXV9 100 aa13.91□□□□□ -0.18
COL7A1-206ENST00000466591 LINC00574Q9H8X3 128 aa13.91□□□□□ -0.18
COL7A1-206ENST00000466591 LINC00527Q9UJ94 153 aa13.91□□□□□ -0.18
COL7A1-206ENST00000466591 IGHV1-3A0A0C4DH29 117 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 EFCAB10A6NFE3 127 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 ORC5O43913 435 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 CRTAPO75718 401 aaPredicted RBP13.9□□□□□ -0.18
COL7A1-206ENST00000466591 CAPGP40121 348 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 ZNF816Q0VGE8 651 aaPredicted RBP13.9□□□□□ -0.18
COL7A1-206ENST00000466591 ST3GAL4Q11206 333 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 RAB12Q6IQ22 244 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 C8orf59Q8N0T1 100 aaPredicted RBP13.9□□□□□ -0.18
COL7A1-206ENST00000466591 COMMD1Q8N668 190 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 KLHL30-AS1Q8NEE0 82 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 WFDC9Q8NEX5 89 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 OR52M1Q8NGK5 317 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 THRSPQ92748 146 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 MRPS24Q96EL2 167 aaKnown RBP13.9□□□□□ -0.18
COL7A1-206ENST00000466591 RASL11BQ9BPW5 248 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 SELENOIQ9C0D9 397 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 VCXQ9H320 206 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 KCNIP1Q9NZI2 227 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 ZNF581Q9P0T4 197 aa13.9□□□□□ -0.18
COL7A1-206ENST00000466591 SIRT4Q9Y6E7 314 aaPredicted RBP13.9□□□□□ -0.18
COL7A1-206ENST00000466591 PRKDCP78527 4128 aaKnown RBP13.89□□□□□ -0.19
COL7A1-206ENST00000466591 A0A1W2PP11 408 aa13.89□□□□□ -0.19
COL7A1-206ENST00000466591 FAM90A18PA6NE21 464 aa13.89□□□□□ -0.19
COL7A1-206ENST00000466591 FAM90A16PA6NEW6 464 aa13.89□□□□□ -0.19
COL7A1-206ENST00000466591 FAM90A20PA6NIJ5 464 aa13.89□□□□□ -0.19
COL7A1-206ENST00000466591 FAM90A9PA6NNJ1 464 aa13.89□□□□□ -0.19
COL7A1-206ENST00000466591 FAM90A12PA8MX19 464 aa13.89□□□□□ -0.19
COL7A1-206ENST00000466591 FAM90A5PA8MXJ8 464 aa13.89□□□□□ -0.19
COL7A1-206ENST00000466591 RRP9O43818 475 aaKnown RBP13.89□□□□□ -0.19
COL7A1-206ENST00000466591 FAM90A15PP0C7V4 464 aa13.89□□□□□ -0.19
COL7A1-206ENST00000466591 FAM90A13PP0C7W8 464 aa13.89□□□□□ -0.19
COL7A1-206ENST00000466591 FAM90A14PP0C7W9 464 aa13.89□□□□□ -0.19
COL7A1-206ENST00000466591 FAM90A24PP0C7X0 464 aa13.89□□□□□ -0.19
COL7A1-206ENST00000466591 MAPK3P27361 379 aaPredicted RBP13.89□□□□□ -0.19
COL7A1-206ENST00000466591 RPL23AP62750 156 aaKnown RBP13.89□□□□□ -0.19
COL7A1-206ENST00000466591 SYT6Q5T7P8 510 aaPredicted RBP13.89□□□□□ -0.19
COL7A1-206ENST00000466591 DMKNQ6E0U4 476 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms