RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 C10orf99Q6UWK7 81 aa10.69□□□□□ -0.7
CHD3-207ENST00000466233 TMPRSS11AQ6ZMR5 421 aa10.69□□□□□ -0.7
CHD3-207ENST00000466233 CDH26Q8IXH8 852 aa10.69□□□□□ -0.7
CHD3-207ENST00000466233 STPG2Q8N412 459 aa10.69□□□□□ -0.7
CHD3-207ENST00000466233 SUMF2Q8NBJ7 301 aa10.69□□□□□ -0.7
CHD3-207ENST00000466233 OR52I1Q8NGK6 324 aa10.69□□□□□ -0.7
CHD3-207ENST00000466233 OR2T10Q8NGZ9 312 aa10.69□□□□□ -0.7
CHD3-207ENST00000466233 OR52N1Q8NH53 320 aa10.69□□□□□ -0.7
CHD3-207ENST00000466233 PLPPR1Q8TBJ4 325 aa10.69□□□□□ -0.7
CHD3-207ENST00000466233 MRGPRDQ8TDS7 321 aa10.69□□□□□ -0.7
CHD3-207ENST00000466233 ST6GALNAC6Q969X2 333 aa10.69□□□□□ -0.7
CHD3-207ENST00000466233 TMEM106AQ96A25 262 aa10.69□□□□□ -0.7
CHD3-207ENST00000466233 NR1H4Q96RI1 486 aaPredicted RBP10.69□□□□□ -0.7
CHD3-207ENST00000466233 CHCHD3Q9NX63 227 aaKnown RBP10.69□□□□□ -0.7
CHD3-207ENST00000466233 IGHV1-3A0A0C4DH29 117 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 WI2-2373I1.2A0A1W2PRP0 233 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 C15orf65H3BRN8 121 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 CA11O75493 328 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 IGKV1D-33P01593 117 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 IGKV1-33P01594 117 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 GLAP06280 429 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 ELANEP08246 267 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 NHLRC4P0CG21 123 aaPredicted RBP10.68□□□□□ -0.7
CHD3-207ENST00000466233 GTF2F2P13984 249 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 ZNF93P35789 620 aaPredicted RBP10.68□□□□□ -0.7
CHD3-207ENST00000466233 CDX1P47902 265 aaPredicted RBP10.68□□□□□ -0.7
CHD3-207ENST00000466233 PPP3R1P63098 170 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 FOXE3Q13461 319 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 ZSCAN26Q16670 478 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 PNLIPRP3Q17RR3 467 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 PIGYQ3MUY2 71 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 ZNF554Q86TJ5 538 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 ZNF329Q86UD4 541 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 ZNF695Q8IW36 515 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 GAPTQ8N292 157 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 OR51A2Q8NGJ7 313 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 S100A13Q99584 98 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 ING3Q9NXR8 418 aa10.68□□□□□ -0.7
CHD3-207ENST00000466233 SIRT4Q9Y6E7 314 aaPredicted RBP10.68□□□□□ -0.7
CHD3-207ENST00000466233 FAM90A10PA6NDY2 464 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 FAM90A7PA6NKC0 464 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 FAM90A23PA8MXZ1 464 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 HSPB6O14558 160 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 OGG1O15527 345 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 RRP9O43818 475 aaKnown RBP10.67□□□□□ -0.7
CHD3-207ENST00000466233 OR7C1O76099 320 aaPredicted RBP10.67□□□□□ -0.7
CHD3-207ENST00000466233 HTR3BO95264 441 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 BDKRB2P30411 391 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 SSTR5P35346 364 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 KIR2DS1Q14954 304 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 DEFB121Q5J5C9 76 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 TRAT1Q6PIZ9 186 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 ZNF497Q6ZNH5 498 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 SATL1Q86VE3 508 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 STX19Q8N4C7 294 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 TMEM104Q8NE00 496 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 OR8U1Q8NH10 309 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 RFESDQ8TAC1 157 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 RGP1Q92546 391 aaPredicted RBP10.67□□□□□ -0.7
CHD3-207ENST00000466233 SMIM19Q96E16 107 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 EAF1Q96JC9 268 aaPredicted RBP10.67□□□□□ -0.7
CHD3-207ENST00000466233 GFOD1Q9NXC2 390 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 BABAM2Q9NXR7 383 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 TAS2R4Q9NYW5 299 aa10.67□□□□□ -0.7
CHD3-207ENST00000466233 SH2D7A6NKC9 451 aaPredicted RBP10.66□□□□□ -0.7
CHD3-207ENST00000466233 MOSP00540 346 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 MT-ND4P03905 459 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 IGFBP3P17936 291 aaPredicted RBP10.66□□□□□ -0.7
CHD3-207ENST00000466233 GPR12P47775 334 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 DGCR2P98153 550 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 CD69Q07108 199 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 RIPK1Q13546 671 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 DIAPH2-AS1Q14236 149 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 YIF1BQ5BJH7 314 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 CXorf66Q5JRM2 361 aaPredicted RBP10.66□□□□□ -0.7
CHD3-207ENST00000466233 DDI2Q5TDH0 399 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 SLC25A48Q6ZT89 311 aaKnown RBP10.66□□□□□ -0.7
CHD3-207ENST00000466233 Q8N9W7 124 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 RTN4IP1Q8WWV3 396 aaPredicted RBP10.66□□□□□ -0.7
CHD3-207ENST00000466233 LEAP2Q969E1 77 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 ARL11Q969Q4 196 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 NOL4LQ96MY1 436 aaPredicted RBP10.66□□□□□ -0.7
CHD3-207ENST00000466233 WWC2-AS2Q96NR7 200 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 FAM192AQ9GZU8 254 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 AMBNQ9NP70 447 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 PLSCR3Q9NRY6 295 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 RCC2Q9P258 522 aaKnown RBP10.66□□□□□ -0.7
CHD3-207ENST00000466233 CKLFQ9UBR5 152 aa10.66□□□□□ -0.7
CHD3-207ENST00000466233 COL7A1Q02388 2944 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 TRBV5-5A0A0J9YX44 114 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 NUDT19A8MXV4 375 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 CCL24O00175 119 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 SDCBPO00560 298 aaPredicted RBP10.65□□□□□ -0.7
CHD3-207ENST00000466233 GEMIN2O14893 280 aaKnown RBP10.65□□□□□ -0.7
CHD3-207ENST00000466233 SPINT2O43291 252 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 CDRT1O95170 752 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 IGF1P05019 195 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 OR5H8P0DN80 308 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 FSTP19883 344 aa10.65□□□□□ -0.7
CHD3-207ENST00000466233 SOX2P48431 317 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms