RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 TNFSF10P50591 281 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 DVL1P1P54792 670 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-217ENST00000466159 TBC1D28Q2M2D7 210 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 NMSQ5H8A3 153 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 ZNF324BQ6AW86 544 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-217ENST00000466159 Q6P435 159 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 P4HA3Q7Z4N8 544 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 CMTM1Q8IZ96 169 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 PRR18Q8N4B5 295 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 TMEM178AQ8NBL3 297 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 OR10J5Q8NHC4 309 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 GTF3AQ92664 365 aaKnown RBP7.6□□□□□ -1.19
SYNE1-217ENST00000466159 AKR1E2Q96JD6 320 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 PKIBQ9C010 78 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 RIMS4Q9H426 269 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-217ENST00000466159 CACFD1Q9UGQ2 172 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 ERRFI1Q9UJM3 462 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-217ENST00000466159 OR2W1Q9Y3N9 320 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 TRBV6-6A0A0A6YYG2 114 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 PROB1E7EW31 1015 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 J3QT63 122 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 SIRPB1O00241 398 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 SMPD2O60906 423 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 TMEM50AO95807 157 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 PRH1P02810 166 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 H2AFB1P0C5Y9 115 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 SELEP16581 610 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 VDAC1P21796 283 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 SNCAP37840 140 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 CCL11P51671 97 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 B2MP61769 119 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 PPP1CBP62140 327 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 HFEQ30201 348 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 SHEQ5VZ18 495 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 ZNF880Q6PDB4 577 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 LINC00518Q8N0U6 118 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 SCCPDHQ8NBX0 429 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 OR51H1Q8NH63 302 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 UBALD1Q8TB05 177 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 PLPPR1Q8TBJ4 325 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 SPIN2AQ99865 258 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 SPIN2BQ9BPZ2 258 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 LUZP4Q9P127 313 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 OR1A1Q9P1Q5 309 aa7.6□□□□□ -1.19
SYNE1-217ENST00000466159 A0A1B0GV50 99 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 PVALBP20472 110 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-217ENST00000466159 F2RP25116 425 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 PPT1P50897 306 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 SOX8P57073 446 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 HLA-DRB3P79483 266 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 ETV3LQ6ZN32 361 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 TMEM182Q6ZP80 229 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-217ENST00000466159 ODF3L1Q8IXM7 274 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 H1FOOQ8IZA3 346 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-217ENST00000466159 TMEM252Q8N6L7 170 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 TMEM171Q8WVE6 324 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 GMPPAQ96IJ6 420 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-217ENST00000466159 RTL8AQ9BWD3 113 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 SCRT1Q9BWW7 348 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 C19orf12Q9NSK7 152 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 EP300Q09472 2414 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-217ENST00000466159 A0A0G2JRQ6 117 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 CLEC18AA5D8T8 446 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 H0Y980 276 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 H7C2Y5 167 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 CDIPTO14735 213 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 CST7O76096 145 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 OR2H2O95918 312 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 UBE2NP61088 152 aaKnown RBP7.59□□□□□ -1.19
SYNE1-217ENST00000466159 ID3Q02535 119 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 IZUMO4Q1ZYL8 232 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 AKIRIN2Q53H80 203 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 TMEM217Q8N7C4 229 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 CLEC18CQ8NCF0 446 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 FDCSPQ8NFU4 85 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 OR5D13Q8NGL4 314 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 SLC25A40Q8TBP6 338 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 PLEKHF2Q9H8W4 249 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 GLRX2Q9NS18 164 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 LYRM2Q9NU23 88 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-217ENST00000466159 ZNF175Q9Y473 711 aa7.59□□□□□ -1.19
SYNE1-217ENST00000466159 H0YL77 283 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 CHST1O43916 411 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 PSG2P11465 335 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 EPHA1P21709 976 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 VAMP2P63027 116 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 ZNF154Q13106 437 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 GUK1Q16774 197 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 OR5C1Q8NGR4 320 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 TRIB1Q96RU8 372 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 EIF5A2Q9GZV4 153 aaKnown RBP7.58□□□□□ -1.2
SYNE1-217ENST00000466159 IFT22Q9H7X7 185 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 CDH20Q9HBT6 801 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 TAAR3PQ9P1P4 343 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 NDRG3Q9UGV2 375 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 DIDO1Q9BTC0 2240 aaKnown RBP7.58□□□□□ -1.2
SYNE1-217ENST00000466159 TTC28Q96AY4 2481 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 DMXL1Q9Y485 3027 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 DUXBA0A1W2PPF3 345 aa7.58□□□□□ -1.2
SYNE1-217ENST00000466159 LRP5LA4QPB2 252 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms