RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GABARAPH6UMI1 98 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 SULT1C2O00338 296 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 GSTZ1O43708 216 aaPredicted RBP9.17□□□□□ -0.94
VCP-204ENST00000466100 ENSAO43768 121 aaKnown RBP9.17□□□□□ -0.94
VCP-204ENST00000466100 LPLP06858 475 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 MSMBP08118 114 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 CCL3L1P16619 93 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 PRSS3P35030 304 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 GLP1RP43220 463 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 DGCR2P98153 550 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 HMGN3Q15651 99 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 SRSF7Q16629 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
VCP-204ENST00000466100 C17orf58Q2M2W7 97 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 C5orf24Q7Z6I8 188 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 TRAPPC6BQ86SZ2 158 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 ZNF554Q86TJ5 538 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 FAM185AQ8N0U4 392 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 C11orf42Q8N5U0 333 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 GVQW1Q8N7I0 195 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 OR52I2Q8NH67 350 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 MRGPRDQ8TDS7 321 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 C15orf40Q8WUR7 153 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 CCDC107Q8WV48 283 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 SNAPC3Q92966 411 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 DMRTB1Q96MA1 342 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 OR6C3Q9NZP0 311 aa9.17□□□□□ -0.94
VCP-204ENST00000466100 ZNF230Q9UIE0 474 aaPredicted RBP9.17□□□□□ -0.94
VCP-204ENST00000466100 UBE2J1Q9Y385 318 aaPredicted RBP9.17□□□□□ -0.94
VCP-204ENST00000466100 RBMX2Q9Y388 322 aaKnown RBP9.17□□□□□ -0.94
VCP-204ENST00000466100 TRGV10A0A0A0MS01 117 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 KIR2DS1A0A191URI9 304 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 MEIS3P1A6NDR6 274 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 NPIPB11E5RHQ5 1161 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 LIPFP07098 398 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 PPIAL4GP0DN37 164 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 NAT1P18440 290 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 SSTR5P35346 364 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 CBX5P45973 191 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 GZMKP49863 264 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 HLA-DRB3P79483 266 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 MRPS10P82664 201 aaKnown RBP9.16□□□□□ -0.94
VCP-204ENST00000466100 ZNF45Q02386 682 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 HOGA1Q86XE5 327 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 KIR3DL3Q8N743 410 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 Q8N7P7 452 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 LINC01356Q8N9X3 169 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 S100ZQ8WXG8 99 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 MAFIPQ8WZ33 124 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 TRIM63Q969Q1 353 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 LPAR2Q9HBW0 351 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 CHMP1AQ9HD42 196 aaPredicted RBP9.16□□□□□ -0.94
VCP-204ENST00000466100 TAS2R3Q9NYW6 316 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 CALYQ9NYX4 217 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 MTFP1Q9UDX5 166 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 OPN4Q9UHM6 478 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 TRAPPC2LQ9UL33 140 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 INSIG2Q9Y5U4 225 aa9.16□□□□□ -0.94
VCP-204ENST00000466100 TEP1Q99973 2627 aaKnown RBP9.15□□□□□ -0.94
VCP-204ENST00000466100 TRAV20A0A0B4J274 112 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 IGKV1-6A0A0C4DH72 117 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 KBTBD11-OT1A0A1B0GTJ5 212 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 A0A1W2PQ09 198 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 ZNF729A6NN14 1252 aaPredicted RBP9.15□□□□□ -0.94
VCP-204ENST00000466100 C17orf98A8MV24 154 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 M0R1W7 72 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 LANCL1O43813 399 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 ORC5O43913 435 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 RBP4P02753 201 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 ZNF728P0DKX0 622 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 MMP9P14780 707 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 ZNF16P17020 682 aaPredicted RBP9.15□□□□□ -0.94
VCP-204ENST00000466100 GDNFP39905 211 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 MRPS15P82914 257 aaKnown RBP9.15□□□□□ -0.94
VCP-204ENST00000466100 PAX8Q06710 450 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 HERPUD1Q15011 391 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 RNASE12Q5GAN4 147 aaKnown RBP9.15□□□□□ -0.94
VCP-204ENST00000466100 C6orf183Q5T699 404 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 TRAT1Q6PIZ9 186 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 TMEM186Q96B77 213 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 ZNF714Q96N38 554 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 SIRPDQ9H106 197 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 TAF9BQ9HBM6 251 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 KLK11Q9UBX7 282 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 MGAT4AQ9UM21 535 aa9.15□□□□□ -0.94
VCP-204ENST00000466100 TRDCB7Z8K6 153 aa9.14□□□□□ -0.95
VCP-204ENST00000466100 F2RL2O00254 374 aa9.14□□□□□ -0.95
VCP-204ENST00000466100 SMAD7O15105 426 aaKnown RBP9.14□□□□□ -0.95
VCP-204ENST00000466100 MMP23AO75900 390 aa9.14□□□□□ -0.95
VCP-204ENST00000466100 GZMHP20718 246 aa9.14□□□□□ -0.95
VCP-204ENST00000466100 RCVRNP35243 200 aa9.14□□□□□ -0.95
VCP-204ENST00000466100 DVL1P1P54792 670 aaPredicted RBP9.14□□□□□ -0.95
VCP-204ENST00000466100 ERVFRD-1P60508 538 aa9.14□□□□□ -0.95
VCP-204ENST00000466100 SSBP1Q04837 148 aaKnown RBP9.14□□□□□ -0.95
VCP-204ENST00000466100 PYDC2Q56P42 97 aa9.14□□□□□ -0.95
VCP-204ENST00000466100 HEPN1Q6WQI6 88 aa9.14□□□□□ -0.95
VCP-204ENST00000466100 C1orf122Q6ZSJ8 110 aa9.14□□□□□ -0.95
VCP-204ENST00000466100 LYSMD2Q8IV50 215 aa9.14□□□□□ -0.95
VCP-204ENST00000466100 Q8N402 240 aa9.14□□□□□ -0.95
VCP-204ENST00000466100 GDPD1Q8N9F7 314 aa9.14□□□□□ -0.95
VCP-204ENST00000466100 ZNF565Q8N9K5 539 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms