RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 ATG5Q9H1Y0 275 aa9.71□□□□□ -0.86
APTX-213ENST00000465003 METTL8Q9H825 291 aaKnown RBP9.71□□□□□ -0.86
APTX-213ENST00000465003 SEBOXQ9HB31 216 aaPredicted RBP9.71□□□□□ -0.86
APTX-213ENST00000465003 PLEKHJ1Q9NW61 149 aa9.71□□□□□ -0.86
APTX-213ENST00000465003 NUP50Q9UKX7 468 aa9.71□□□□□ -0.86
APTX-213ENST00000465003 IGHV1-8P0DP01 117 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 NFYBP25208 207 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 CFPP27918 469 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 ERP29P30040 261 aaKnown RBP9.7□□□□□ -0.86
APTX-213ENST00000465003 ZNF497Q6ZNH5 498 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 IZUMO1Q8IYV9 350 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 SLC25A38Q96DW6 304 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 ZNF48Q96MX3 618 aaPredicted RBP9.7□□□□□ -0.86
APTX-213ENST00000465003 SUCNR1Q9BXA5 334 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 MS4A7Q9GZW8 240 aaPredicted RBP9.7□□□□□ -0.86
APTX-213ENST00000465003 DCSTAMPQ9H295 470 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 TNFRSF19Q9NS68 423 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 AK3Q9UIJ7 227 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 KCNK7Q9Y2U2 307 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 IGHV3-43A0A0B4J1X8 118 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 TMEM30CPA0ZSE6 113 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 FOXI3A8MTJ6 420 aaPredicted RBP9.7□□□□□ -0.86
APTX-213ENST00000465003 M0R1W7 72 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 RGS13O14921 159 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 CLPXO76031 633 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 IGHV3-43DP0DP04 118 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 PTHLHP12272 177 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 EIF2B2P49770 351 aaKnown RBP9.7□□□□□ -0.86
APTX-213ENST00000465003 MEF2CQ06413 473 aaPredicted RBP9.7□□□□□ -0.86
APTX-213ENST00000465003 KIR3DL3Q8N743 410 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 SETD6Q8TBK2 473 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 SUN5Q8TC36 379 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 MAFIPQ8WZ33 124 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 SLC25A46Q96AG3 418 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 PECRQ9BY49 303 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 SPACA1Q9HBV2 294 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 CALYQ9NYX4 217 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 LPAR3Q9UBY5 353 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 RAB22AQ9UL26 194 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 TRAPPC2LQ9UL33 140 aa9.7□□□□□ -0.86
APTX-213ENST00000465003 FBN1P35555 2871 aaKnown RBP9.69□□□□□ -0.86
APTX-213ENST00000465003 IGHV1-69DA0A0B4J2H0 117 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 A0A0U1RQK1 487 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A10PA6NDY2 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A18PA6NE21 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A16PA6NEW6 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 CCDC160A6NGH7 325 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A20PA6NIJ5 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A8PA6NJQ4 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A7PA6NKC0 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 C17orf98A8MV24 154 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A22PA8MWA6 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A12PA8MX19 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A5PA8MXJ8 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A23PA8MXZ1 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 RAB27BO00194 218 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 IL1AP01583 271 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 IGHV1-69P01742 117 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 MT-ND4P03905 459 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A15PP0C7V4 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A13PP0C7W8 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A14PP0C7W9 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM90A24PP0C7X0 464 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 PRTN3P24158 256 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 PLA1AQ53H76 456 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 Q6ZTK2 550 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 LHFPL4Q7Z7J7 247 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 FAM89BQ8N5H3 189 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 MRPL30Q8TCC3 161 aaKnown RBP9.69□□□□□ -0.86
APTX-213ENST00000465003 ISOC1Q96CN7 298 aa9.69□□□□□ -0.86
APTX-213ENST00000465003 A0A1W2PPE3 182 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 ZNF701M0R085 212 aaPredicted RBP9.68□□□□□ -0.86
APTX-213ENST00000465003 FCER2P06734 321 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 SAA4P35542 130 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 GNG10P50151 68 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 DEFB112Q30KQ8 113 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 LDLRAD2Q5SZI1 272 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 SLC35E4Q6ICL7 350 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 ZNF565Q8N9K5 539 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 OR56B1Q8NGI3 324 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 OR10R2Q8NGX6 335 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 OR1L1Q8NH94 360 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 TAF15Q92804 592 aaKnown RBP eCLIP9.68□□□□□ -0.86
APTX-213ENST00000465003 RAB3CQ96E17 227 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 CHMP1AQ9HD42 196 aaPredicted RBP9.68□□□□□ -0.86
APTX-213ENST00000465003 COMMD3Q9UBI1 195 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 FBLN5Q9UBX5 448 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 UBE2J1Q9Y385 318 aaPredicted RBP9.68□□□□□ -0.86
APTX-213ENST00000465003 KBTBD11-OT1A0A1B0GTJ5 212 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 A0A1W2PPH5 198 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 MEIOCA2RUB1 952 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 C12orf77C9JDV5 145 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 H3BMQ9 156 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 RBM39Q14498 530 aaKnown RBP9.68□□□□□ -0.86
APTX-213ENST00000465003 SIGLECL1Q8N7X8 197 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 SAMD12Q8N8I0 201 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 GCDHQ92947 438 aaPredicted RBP9.68□□□□□ -0.86
APTX-213ENST00000465003 ARL11Q969Q4 196 aa9.68□□□□□ -0.86
APTX-213ENST00000465003 RBMXL1Q96E39 390 aaKnown RBP9.68□□□□□ -0.86
APTX-213ENST00000465003 KIRREL1Q96J84 757 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms