RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 M0QX08 132 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 SH2D1AO60880 128 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 UGT2B11O75310 529 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 SOX14O95416 240 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 CDS2O95674 445 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 GP1BAP07359 652 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 LIMS3P0CW19 117 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 LIMS4P0CW20 117 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 EVI2BP34910 448 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 RCVRNP35243 200 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 GZMMP51124 257 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 MP68P56378 58 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 RAB2AP61019 212 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 XRCC4Q13426 336 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 RBM48Q5RL73 367 aaKnown RBP1.91□□□□□ -2.1
CLK1-208ENST00000464454 NIT1Q86X76 327 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 HS3ST5Q8IZT8 346 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 MUC15Q8N387 334 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 KRTCAP2Q8N6L1 136 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 OR4A5Q8NH83 315 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 PRSS27Q9BQR3 290 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 ACBD6Q9BR61 282 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 MED10Q9BTT4 135 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 ARL6Q9H0F7 186 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 OR51E2Q9H255 320 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 KCNIP2Q9NS61 270 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 DMAC2Q9NW81 257 aa1.91□□□□□ -2.1
CLK1-208ENST00000464454 LRPPRCP42704 1394 aaKnown RBP1.9□□□□□ -2.11
CLK1-208ENST00000464454 MYO5BQ9ULV0 1848 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 ERICH4A6NGS2 130 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 IQCF5A8MTL0 148 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 GPR171O14626 319 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 PHYHO14832 338 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 EEF1E1O43324 174 aaKnown RBP1.9□□□□□ -2.11
CLK1-208ENST00000464454 CYTH3O43739 400 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 BRI3O95415 125 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 NPPAP01160 153 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 SYT1P21579 422 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 SKP2Q13309 424 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 C10orf91Q5T1B1 145 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 TCF24Q7RTU0 167 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 FAM19A3Q7Z5A8 133 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 LYPD6Q86Y78 171 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 OR11G2Q8NGC1 345 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 CCDC12Q8WUD4 166 aaPredicted RBP1.9□□□□□ -2.11
CLK1-208ENST00000464454 HIST1H2BAQ96A08 127 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 RAD51AP1Q96B01 352 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 ALX4Q9H161 411 aaPredicted RBP1.9□□□□□ -2.11
CLK1-208ENST00000464454 RPUSD1Q9UJJ7 312 aaKnown RBP1.9□□□□□ -2.11
CLK1-208ENST00000464454 PHLDA3Q9Y5J5 127 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 URGCP-MRPS24S4R325 110 aa1.9□□□□□ -2.11
CLK1-208ENST00000464454 DNMT1P26358 1616 aaKnown RBP1.9□□□□□ -2.11
CLK1-208ENST00000464454 CEP170Q5SW79 1584 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 DHX57Q6P158 1386 aaKnown RBP1.89□□□□□ -2.11
CLK1-208ENST00000464454 PIK3R4Q99570 1358 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 IGHV3OR15-7A0A075B7D8 119 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 EPPINO95925 133 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 ACTR1BP42025 376 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 CST6Q15828 149 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 TCF23Q7RTU1 214 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 KRTAP13-1Q8IUC0 172 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 SELENOHQ8IZQ5 122 aaKnown RBP1.89□□□□□ -2.11
CLK1-208ENST00000464454 DYNC2LI1Q8TCX1 351 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 LRRC45Q96CN5 670 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 UGT2B28Q9BY64 529 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 CHMP4BQ9H444 224 aaKnown RBP1.89□□□□□ -2.11
CLK1-208ENST00000464454 SLC23A2Q9UGH3 650 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 FBXL3Q9UKT7 428 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 LINC00588Q9Y4M8 146 aa1.89□□□□□ -2.11
CLK1-208ENST00000464454 A0A1W2PNM2 257 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 MKRN2OSH3BPM6 223 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 LIN7AO14910 233 aaPredicted RBP1.88□□□□□ -2.11
CLK1-208ENST00000464454 LECT2O14960 151 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 RAB36O95755 333 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 LTAP01374 205 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 KDELR2P33947 212 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 RAB8AP61006 207 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 DYNLL1P63167 89 aaKnown RBP1.88□□□□□ -2.11
CLK1-208ENST00000464454 APOFQ13790 326 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 TTC33Q6PID6 262 aaPredicted RBP1.88□□□□□ -2.11
CLK1-208ENST00000464454 MTERF4Q7Z6M4 381 aaKnown RBP1.88□□□□□ -2.11
CLK1-208ENST00000464454 CRLF3Q8IUI8 442 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 ATP6V1C2Q8NEY4 427 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 OR8K1Q8NGG5 319 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 OR5D18Q8NGL1 313 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 OR4P4Q8NGL7 312 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 OR5AK3PQ8NH89 298 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 ANGPTL6Q8NI99 470 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 RNASEH2CQ8TDP1 164 aaKnown RBP1.88□□□□□ -2.11
CLK1-208ENST00000464454 TMEM56Q96MV1 263 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 OR8B2Q96RD0 313 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 POTEKPQ9BYX7 375 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 ASCL3Q9NQ33 180 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 MS4A12Q9NXJ0 267 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 PTPRKQ15262 1439 aa1.88□□□□□ -2.11
CLK1-208ENST00000464454 C9J4A7 227 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 J3QRE1 110 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 SYNGR1O43759 233 aa1.87□□□□□ -2.11
CLK1-208ENST00000464454 CTSGP08311 255 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms