RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 DNAJB11Q9UBS4 358 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 KCNIP3Q9Y2W7 256 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 HEATR1Q9H583 2144 aaKnown RBP12.28□□□□□ -0.44
COL5A1-205ENST00000464187 ZG16O60844 167 aa12.27□□□□□ -0.44
COL5A1-205ENST00000464187 PPYP01298 95 aa12.27□□□□□ -0.44
COL5A1-205ENST00000464187 DUSP1P28562 367 aa12.27□□□□□ -0.44
COL5A1-205ENST00000464187 NUP62P37198 522 aaPredicted RBP12.27□□□□□ -0.44
COL5A1-205ENST00000464187 TFF3Q07654 80 aa12.27□□□□□ -0.44
COL5A1-205ENST00000464187 IL24Q13007 206 aa12.27□□□□□ -0.44
COL5A1-205ENST00000464187 PAN3Q58A45 887 aaKnown RBP12.27□□□□□ -0.44
COL5A1-205ENST00000464187 LINC00596Q86U02 117 aa12.27□□□□□ -0.44
COL5A1-205ENST00000464187 EIF4E3Q8N5X7 224 aaKnown RBP12.27□□□□□ -0.44
COL5A1-205ENST00000464187 TMEM171Q8WVE6 324 aa12.27□□□□□ -0.44
COL5A1-205ENST00000464187 ADAT1Q9BUB4 502 aaKnown RBP12.27□□□□□ -0.44
COL5A1-205ENST00000464187 SUCNR1Q9BXA5 334 aa12.27□□□□□ -0.44
COL5A1-205ENST00000464187 PKIBQ9C010 78 aa12.27□□□□□ -0.44
COL5A1-205ENST00000464187 SHARPINQ9H0F6 387 aa12.27□□□□□ -0.44
COL5A1-205ENST00000464187 DUSP13Q9UII6 198 aa12.27□□□□□ -0.44
COL5A1-205ENST00000464187 ARID1AO14497 2285 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 A0A1B0GW55 424 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 C3orf80F5H4A9 247 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 IFNA21P01568 189 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 DUX4L2P0CJ85 424 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 DUX4L3P0CJ86 424 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 DUX4L4P0CJ87 422 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 DUX4L5P0CJ88 424 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 DUX4L6P0CJ89 424 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 DUX4L7P0CJ90 424 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 TPT1P13693 172 aaKnown RBP12.27□□□□□ -0.45
COL5A1-205ENST00000464187 RPS23P62266 143 aaKnown RBP12.27□□□□□ -0.45
COL5A1-205ENST00000464187 LIAT1Q6ZQX7 453 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 LRP11Q86VZ4 500 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 LRTM2Q8N967 370 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 SUMF2Q8NBJ7 301 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 NUP37Q8NFH4 326 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 OR5T2Q8NGG2 359 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 NEK7Q8TDX7 302 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 SLC5A7Q9GZV3 580 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 OR51I2Q9H344 312 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 PLK3Q9H4B4 646 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 TMEM100Q9NV29 134 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 DUX4Q9UBX2 424 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 NUP50Q9UKX7 468 aa12.27□□□□□ -0.45
COL5A1-205ENST00000464187 TMA7Q9Y2S6 64 aaKnown RBP12.27□□□□□ -0.45
COL5A1-205ENST00000464187 LGALS8O00214 317 aa12.26□□□□□ -0.45
COL5A1-205ENST00000464187 RHBDL1O75783 438 aa12.26□□□□□ -0.45
COL5A1-205ENST00000464187 SCTP09683 121 aa12.26□□□□□ -0.45
COL5A1-205ENST00000464187 IL13RA2Q14627 380 aa12.26□□□□□ -0.45
COL5A1-205ENST00000464187 HERPUD1Q15011 391 aa12.26□□□□□ -0.45
COL5A1-205ENST00000464187 WDR86Q86TI4 376 aa12.26□□□□□ -0.45
COL5A1-205ENST00000464187 FOXRED2Q8IWF2 684 aa12.26□□□□□ -0.45
COL5A1-205ENST00000464187 FAM58AQ8N1B3 248 aa12.26□□□□□ -0.45
COL5A1-205ENST00000464187 CCDC71LQ8N9Z2 235 aa12.26□□□□□ -0.45
COL5A1-205ENST00000464187 MSI2Q96DH6 328 aaKnown RBP12.26□□□□□ -0.45
COL5A1-205ENST00000464187 C18orf12Q96KH6 178 aa12.26□□□□□ -0.45
COL5A1-205ENST00000464187 ESRP2Q9H6T0 727 aaKnown RBP12.26□□□□□ -0.45
COL5A1-205ENST00000464187 H0YL77 283 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 J3QT63 122 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 IGHV3-13P01766 116 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 HKR1P10072 659 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 KLF3P57682 345 aaPredicted RBP12.25□□□□□ -0.45
COL5A1-205ENST00000464187 OR8G1Q15617 311 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 FAM209AQ5JX71 171 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 NCMAPQ5T1S8 102 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 ADAM5Q6NVV9 412 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 Q6ZR03 302 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 LYZL2Q7Z4W2 148 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 ZNF843Q8N446 348 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 MRPL30Q8TCC3 161 aaKnown RBP12.25□□□□□ -0.45
COL5A1-205ENST00000464187 GLYATL2Q8WU03 294 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 ITLN2Q8WWU7 325 aaPredicted RBP12.25□□□□□ -0.45
COL5A1-205ENST00000464187 SYT3Q9BQG1 590 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 RTL8AQ9BWD3 113 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 MSL2Q9HCI7 577 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 IGLV3-9A0A075B6K5 115 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 TRAV24A0A0B4J272 114 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 H7C1Q1 480 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 BET1O15155 118 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 MLNRO43193 412 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 DEDDO75618 318 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 CLDN14O95500 239 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 AGAP20933 346 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 FAM76BQ5HYJ3 339 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 BAP18Q8IXM2 172 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 LHFPL5Q8TAF8 219 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 PLPPR2Q96GM1 343 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 SPACA1Q9HBV2 294 aa12.25□□□□□ -0.45
COL5A1-205ENST00000464187 IGKV1-6A0A0C4DH72 117 aa12.24□□□□□ -0.45
COL5A1-205ENST00000464187 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.24□□□□□ -0.45
COL5A1-205ENST00000464187 TRDCB7Z8K6 153 aa12.24□□□□□ -0.45
COL5A1-205ENST00000464187 KRBOX1C9JBD0 128 aa12.24□□□□□ -0.45
COL5A1-205ENST00000464187 PHF1O43189 567 aaPredicted RBP12.24□□□□□ -0.45
COL5A1-205ENST00000464187 FGF16O43320 207 aa12.24□□□□□ -0.45
COL5A1-205ENST00000464187 KCNJ3P48549 501 aa12.24□□□□□ -0.45
COL5A1-205ENST00000464187 C20orf204Q6ZNR8 217 aa12.24□□□□□ -0.45
COL5A1-205ENST00000464187 ZNF808Q8N4W9 903 aaPredicted RBP12.24□□□□□ -0.45
COL5A1-205ENST00000464187 TP53RKQ96S44 253 aa12.24□□□□□ -0.45
COL5A1-205ENST00000464187 MRPL37Q9BZE1 423 aaKnown RBP12.24□□□□□ -0.45
COL5A1-205ENST00000464187 IFT22Q9H7X7 185 aa12.24□□□□□ -0.45
COL5A1-205ENST00000464187 LSM5Q9Y4Y9 91 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms