RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 GPR50Q13585 617 aa17.73■□□□□ 0.43
USP4-208ENST00000464168 CXorf66Q5JRM2 361 aaPredicted RBP17.73■□□□□ 0.43
USP4-208ENST00000464168 TMEM104Q8NE00 496 aa17.73■□□□□ 0.43
USP4-208ENST00000464168 OR2T10Q8NGZ9 312 aa17.73■□□□□ 0.43
USP4-208ENST00000464168 OR8U1Q8NH10 309 aa17.73■□□□□ 0.43
USP4-208ENST00000464168 TSEN15Q8WW01 171 aaKnown RBP17.73■□□□□ 0.43
USP4-208ENST00000464168 CPNE2Q96FN4 548 aaPredicted RBP17.73■□□□□ 0.43
USP4-208ENST00000464168 PRR25Q96S07 402 aa17.73■□□□□ 0.43
USP4-208ENST00000464168 GON7Q9BXV9 100 aa17.73■□□□□ 0.43
USP4-208ENST00000464168 FAM118AQ9NWS6 357 aa17.73■□□□□ 0.43
USP4-208ENST00000464168 SNTNA6NMZ2 147 aa17.72■□□□□ 0.43
USP4-208ENST00000464168 C15orf65H3BRN8 121 aa17.72■□□□□ 0.43
USP4-208ENST00000464168 MAGEB3O15480 346 aa17.72■□□□□ 0.43
USP4-208ENST00000464168 MPZL2O60487 215 aa17.72■□□□□ 0.43
USP4-208ENST00000464168 HTR3BO95264 441 aa17.72■□□□□ 0.43
USP4-208ENST00000464168 ZIK1Q3SY52 487 aaPredicted RBP17.72■□□□□ 0.43
USP4-208ENST00000464168 FAM53AQ6NSI3 398 aaPredicted RBP17.72■□□□□ 0.43
USP4-208ENST00000464168 LINC00311Q8N616 119 aa17.72■□□□□ 0.43
USP4-208ENST00000464168 OR5M8Q8NGP6 311 aa17.72■□□□□ 0.43
USP4-208ENST00000464168 ST6GALNAC6Q969X2 333 aa17.72■□□□□ 0.43
USP4-208ENST00000464168 MYCBPQ99417 103 aaPredicted RBP17.72■□□□□ 0.43
USP4-208ENST00000464168 FAM192AQ9GZU8 254 aa17.72■□□□□ 0.43
USP4-208ENST00000464168 IFT22Q9H7X7 185 aa17.72■□□□□ 0.43
USP4-208ENST00000464168 SCOCQ9UIL1 159 aa17.72■□□□□ 0.43
USP4-208ENST00000464168 ST3GAL6Q9Y274 331 aa17.72■□□□□ 0.43
USP4-208ENST00000464168 CDRT1O95170 752 aa17.71■□□□□ 0.43
USP4-208ENST00000464168 ELANEP08246 267 aa17.71■□□□□ 0.43
USP4-208ENST00000464168 GABRB1P18505 474 aa17.71■□□□□ 0.43
USP4-208ENST00000464168 C9orf66Q5T8R8 295 aa17.71■□□□□ 0.43
USP4-208ENST00000464168 C8orf31Q8N9H6 132 aa17.71■□□□□ 0.43
USP4-208ENST00000464168 OR52M1Q8NGK5 317 aa17.71■□□□□ 0.43
USP4-208ENST00000464168 UBALD1Q8TB05 177 aa17.71■□□□□ 0.43
USP4-208ENST00000464168 RTN4IP1Q8WWV3 396 aaPredicted RBP17.71■□□□□ 0.43
USP4-208ENST00000464168 ARL11Q969Q4 196 aa17.71■□□□□ 0.43
USP4-208ENST00000464168 ERVK13-1Q9NX77 482 aa17.71■□□□□ 0.43
USP4-208ENST00000464168 ORC6Q9Y5N6 252 aa17.71■□□□□ 0.43
USP4-208ENST00000464168 ZNF736B4DX44 427 aaPredicted RBP17.7■□□□□ 0.42
USP4-208ENST00000464168 EI24O14681 340 aa17.7■□□□□ 0.42
USP4-208ENST00000464168 OR7C1O76099 320 aaPredicted RBP17.7■□□□□ 0.42
USP4-208ENST00000464168 CD1BP29016 333 aa17.7■□□□□ 0.42
USP4-208ENST00000464168 SOX2P48431 317 aa17.7■□□□□ 0.42
USP4-208ENST00000464168 RASSF2P50749 326 aa17.7■□□□□ 0.42
USP4-208ENST00000464168 CFHR3Q02985 330 aa17.7■□□□□ 0.42
USP4-208ENST00000464168 MRPL28Q13084 256 aaKnown RBP17.7■□□□□ 0.42
USP4-208ENST00000464168 NHLRC3Q5JS37 347 aa17.7■□□□□ 0.42
USP4-208ENST00000464168 RGP1Q92546 391 aaPredicted RBP17.7■□□□□ 0.42
USP4-208ENST00000464168 S1PR3Q99500 378 aa17.7■□□□□ 0.42
USP4-208ENST00000464168 JAM3Q9BX67 310 aa17.7■□□□□ 0.42
USP4-208ENST00000464168 AMBNQ9NP70 447 aa17.7■□□□□ 0.42
USP4-208ENST00000464168 GFOD1Q9NXC2 390 aa17.7■□□□□ 0.42
USP4-208ENST00000464168 TAS2R4Q9NYW5 299 aa17.7■□□□□ 0.42
USP4-208ENST00000464168 TMEM30CPA0ZSE6 113 aa17.69■□□□□ 0.42
USP4-208ENST00000464168 SEC14L6B5MCN3 397 aa17.69■□□□□ 0.42
USP4-208ENST00000464168 SDCBPO00560 298 aaPredicted RBP17.69■□□□□ 0.42
USP4-208ENST00000464168 FADS2O95864 444 aaKnown RBP17.69■□□□□ 0.42
USP4-208ENST00000464168 MOSP00540 346 aa17.69■□□□□ 0.42
USP4-208ENST00000464168 IGHG4P01861 327 aa17.69■□□□□ 0.42
USP4-208ENST00000464168 ECI1P42126 302 aa17.69■□□□□ 0.42
USP4-208ENST00000464168 GTF2A1P52655 376 aaPredicted RBP17.69■□□□□ 0.42
USP4-208ENST00000464168 GBX2P52951 348 aaPredicted RBP17.69■□□□□ 0.42
USP4-208ENST00000464168 RBM11P57052 281 aaKnown RBP17.69■□□□□ 0.42
USP4-208ENST00000464168 OR52N1Q8NH53 320 aa17.69■□□□□ 0.42
USP4-208ENST00000464168 RBMXL1Q96E39 390 aaKnown RBP17.69■□□□□ 0.42
USP4-208ENST00000464168 HSPB9Q9BQS6 159 aa17.69■□□□□ 0.42
USP4-208ENST00000464168 IL36GQ9NZH8 169 aa17.69■□□□□ 0.42
USP4-208ENST00000464168 ING4Q9UNL4 249 aa17.69■□□□□ 0.42
USP4-208ENST00000464168 GEMIN2O14893 280 aaKnown RBP17.68■□□□□ 0.42
USP4-208ENST00000464168 CCDC107Q8WV48 283 aa17.68■□□□□ 0.42
USP4-208ENST00000464168 PYDC1Q8WXC3 89 aa17.68■□□□□ 0.42
USP4-208ENST00000464168 ASCL2Q99929 193 aa17.68■□□□□ 0.42
USP4-208ENST00000464168 RASL11BQ9BPW5 248 aa17.68■□□□□ 0.42
USP4-208ENST00000464168 METTL9Q9H1A3 318 aa17.68■□□□□ 0.42
USP4-208ENST00000464168 HUWE1Q7Z6Z7 4374 aaKnown RBP17.68■□□□□ 0.42
USP4-208ENST00000464168 IGHV3-43A0A0B4J1X8 118 aa17.67■□□□□ 0.42
USP4-208ENST00000464168 RRP9O43818 475 aaKnown RBP17.67■□□□□ 0.42
USP4-208ENST00000464168 ORC5O43913 435 aa17.67■□□□□ 0.42
USP4-208ENST00000464168 IGHV3-43DP0DP04 118 aa17.67■□□□□ 0.42
USP4-208ENST00000464168 ALDH3A2P51648 485 aa17.67■□□□□ 0.42
USP4-208ENST00000464168 F2RL1P55085 397 aa17.67■□□□□ 0.42
USP4-208ENST00000464168 FHL3Q13643 280 aa17.67■□□□□ 0.42
USP4-208ENST00000464168 KLHL22Q53GT1 634 aa17.67■□□□□ 0.42
USP4-208ENST00000464168 FAM71E2Q8N5Q1 922 aa17.67■□□□□ 0.42
USP4-208ENST00000464168 OR8H1Q8NGG4 311 aa17.67■□□□□ 0.42
USP4-208ENST00000464168 RHOXF1Q8NHV9 184 aa17.67■□□□□ 0.42
USP4-208ENST00000464168 C4orf3Q8WVX3 66 aa17.67■□□□□ 0.42
USP4-208ENST00000464168 GMPPBQ9Y5P6 360 aa17.67■□□□□ 0.42
USP4-208ENST00000464168 SLC31A2O15432 143 aa17.66■□□□□ 0.42
USP4-208ENST00000464168 MT-ND4P03905 459 aa17.66■□□□□ 0.42
USP4-208ENST00000464168 IL3RAP26951 378 aa17.66■□□□□ 0.42
USP4-208ENST00000464168 PSMB8P28062 276 aa17.66■□□□□ 0.42
USP4-208ENST00000464168 RAB40BQ12829 278 aa17.66■□□□□ 0.42
USP4-208ENST00000464168 ZNF497Q6ZNH5 498 aa17.66■□□□□ 0.42
USP4-208ENST00000464168 OR52I1Q8NGK6 324 aa17.66■□□□□ 0.42
USP4-208ENST00000464168 GPR148Q8TDV2 347 aa17.66■□□□□ 0.42
USP4-208ENST00000464168 SIRT4Q9Y6E7 314 aaPredicted RBP17.66■□□□□ 0.42
USP4-208ENST00000464168 ATP5HO75947 161 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 CSTBP04080 98 aaKnown RBP17.65■□□□□ 0.42
USP4-208ENST00000464168 IGF1P05019 195 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 CD2P06729 351 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 SOX6P35712 828 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms