RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 OR56B4Q8NH76 319 aa14.99□□□□□ -0.01
SF3A1-205ENST00000463818 SGCDQ92629 289 aa14.99□□□□□ -0.01
SF3A1-205ENST00000463818 ZNF184Q99676 751 aaPredicted RBP14.99□□□□□ -0.01
SF3A1-205ENST00000463818 MOB4Q9Y3A3 225 aa14.99□□□□□ -0.01
SF3A1-205ENST00000463818 A0A1W2PP11 408 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 A0A1W2PPE3 182 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 A0A1W2PPI3 338 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 TMEM30CPA0ZSE6 113 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 ZNF780AO75290 641 aaPredicted RBP14.98□□□□□ -0.01
SF3A1-205ENST00000463818 PF4V1P10720 104 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 CD33P20138 364 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 RAB7AP51149 207 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 RPS11P62280 158 aaKnown RBP eCLIP14.98□□□□□ -0.01
SF3A1-205ENST00000463818 HES1Q14469 280 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 HNF4GQ14541 408 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 Q499Y3 187 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 SLC22A6Q4U2R8 563 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 ATAD3CQ5T2N8 411 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 LAIR2Q6ISS4 152 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 Q6ZPA2 131 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 ZNF485Q8NCK3 441 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 OR4X2Q8NGF9 303 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 OR10X1Q8NGY0 326 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 CCDC107Q8WV48 283 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 ARL11Q969Q4 196 aa14.98□□□□□ -0.01
SF3A1-205ENST00000463818 GTF2F2P13984 249 aa14.97□□□□□ -0.01
SF3A1-205ENST00000463818 IGLL1P15814 213 aa14.97□□□□□ -0.01
SF3A1-205ENST00000463818 TMEM11P17152 192 aa14.97□□□□□ -0.01
SF3A1-205ENST00000463818 ST3GAL4Q11206 333 aa14.97□□□□□ -0.01
SF3A1-205ENST00000463818 MPV17LQ2QL34 196 aa14.97□□□□□ -0.01
SF3A1-205ENST00000463818 YIF1BQ5BJH7 314 aa14.97□□□□□ -0.01
SF3A1-205ENST00000463818 LINC00596Q86U02 117 aa14.97□□□□□ -0.01
SF3A1-205ENST00000463818 C8orf59Q8N0T1 100 aaPredicted RBP14.97□□□□□ -0.01
SF3A1-205ENST00000463818 OR8H3Q8N146 312 aa14.97□□□□□ -0.01
SF3A1-205ENST00000463818 PHF21AQ96BD5 680 aa14.97□□□□□ -0.01
SF3A1-205ENST00000463818 PLCXD1Q9NUJ7 323 aa14.97□□□□□ -0.01
SF3A1-205ENST00000463818 NECAP2Q9NVZ3 263 aa14.97□□□□□ -0.01
SF3A1-205ENST00000463818 CKLFQ9UBR5 152 aa14.97□□□□□ -0.01
SF3A1-205ENST00000463818 TRAV8-7A0A075B6U6 113 aa14.96□□□□□ -0.01
SF3A1-205ENST00000463818 TRBV5-7A0A0A0MS05 114 aa14.96□□□□□ -0.01
SF3A1-205ENST00000463818 A0A1W2PPK0 400 aa14.96□□□□□ -0.01
SF3A1-205ENST00000463818 MAGEA13PA6NCF6 341 aa14.96□□□□□ -0.01
SF3A1-205ENST00000463818 H0YHG0 523 aa14.96□□□□□ -0.01
SF3A1-205ENST00000463818 C15orf65H3BRN8 121 aa14.96□□□□□ -0.01
SF3A1-205ENST00000463818 MT-ND4P03905 459 aa14.96□□□□□ -0.01
SF3A1-205ENST00000463818 AQP4P55087 323 aa14.96□□□□□ -0.01
SF3A1-205ENST00000463818 GPR176Q14439 515 aa14.96□□□□□ -0.01
SF3A1-205ENST00000463818 UBALD1Q8TB05 177 aa14.96□□□□□ -0.01
SF3A1-205ENST00000463818 NEK7Q8TDX7 302 aa14.96□□□□□ -0.01
SF3A1-205ENST00000463818 PGLYRP3Q96LB9 341 aa14.96□□□□□ -0.01
SF3A1-205ENST00000463818 IGKV1D-33P01593 117 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 IGKV1-33P01594 117 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 PF4P02776 101 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 KHDC1LQ5JSQ8 128 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 FOXB2Q5VYV0 432 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 FAM53AQ6NSI3 398 aaPredicted RBP14.95□□□□□ -0.02
SF3A1-205ENST00000463818 GLIPR1L1Q6UWM5 242 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 ZNF329Q86UD4 541 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 JAGN1Q8N5M9 183 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 OR52M1Q8NGK5 317 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 MRAPQ8TCY5 172 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 MUL1Q969V5 352 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 OR14A2Q96R54 314 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 VCX3BQ9H321 246 aa14.95□□□□□ -0.02
SF3A1-205ENST00000463818 CNOT2Q9NZN8 540 aaKnown RBP14.95□□□□□ -0.02
SF3A1-205ENST00000463818 PNMA8CA0A1B0GUJ8 204 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 PSMB11A5LHX3 300 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 EFCAB10A6NFE3 127 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 CCRL2O00421 344 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 SDCBPO00560 298 aaPredicted RBP14.94□□□□□ -0.02
SF3A1-205ENST00000463818 ORC5O43913 435 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 ATP6V1G2O95670 118 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 GAPDHP04406 335 aaKnown RBP14.94□□□□□ -0.02
SF3A1-205ENST00000463818 REG1BP48304 166 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 LOXL3P58215 753 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 ZNF816Q0VGE8 651 aaPredicted RBP14.94□□□□□ -0.02
SF3A1-205ENST00000463818 ZNF497Q6ZNH5 498 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 MOB3BQ86TA1 216 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 STX19Q8N4C7 294 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 LINC00311Q8N616 119 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 C5orf56Q8N8D9 126 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 ANKRD60Q9BZ19 345 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 FKBP14Q9NWM8 211 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 AURKAIP1Q9NWT8 199 aaPredicted RBP14.94□□□□□ -0.02
SF3A1-205ENST00000463818 GFOD1Q9NXC2 390 aa14.94□□□□□ -0.02
SF3A1-205ENST00000463818 MRPS28Q9Y2Q9 187 aaKnown RBP14.94□□□□□ -0.02
SF3A1-205ENST00000463818 IGHV3-43A0A0B4J1X8 118 aa14.93□□□□□ -0.02
SF3A1-205ENST00000463818 IGHV3-72A0A0B4J1Y9 119 aa14.93□□□□□ -0.02
SF3A1-205ENST00000463818 IGHV1-3A0A0C4DH29 117 aa14.93□□□□□ -0.02
SF3A1-205ENST00000463818 MCRIP1C9JLW8 97 aa14.93□□□□□ -0.02
SF3A1-205ENST00000463818 HSD17B6O14756 317 aa14.93□□□□□ -0.02
SF3A1-205ENST00000463818 PIN1P1O15428 100 aa14.93□□□□□ -0.02
SF3A1-205ENST00000463818 FGF16O43320 207 aa14.93□□□□□ -0.02
SF3A1-205ENST00000463818 MAS1P04201 325 aa14.93□□□□□ -0.02
SF3A1-205ENST00000463818 IGHV3-43DP0DP04 118 aa14.93□□□□□ -0.02
SF3A1-205ENST00000463818 FSTP19883 344 aa14.93□□□□□ -0.02
SF3A1-205ENST00000463818 TAS2R43P59537 309 aa14.93□□□□□ -0.02
SF3A1-205ENST00000463818 EBI3Q14213 229 aa14.93□□□□□ -0.02
SF3A1-205ENST00000463818 NOL4LQ96MY1 436 aaPredicted RBP14.93□□□□□ -0.02
SF3A1-205ENST00000463818 SPACA1Q9HBV2 294 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms