RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 IGLV3-19P01714 112 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 SFTA3P0C7M3 94 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 IRF3Q14653 427 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 OR2C3Q8N628 320 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 C2CD4CQ8TF44 421 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 PCDHGA9Q9Y5G4 932 aaKnown RBP11.13□□□□□ -0.63
NUP58-206ENST00000463407 J3KRW8 73 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 IFNL4K9M1U5 179 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 KIR3DL2P43630 455 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 PAFAH1B2P68402 229 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 RFLNBQ8N5W9 214 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 P2RX4Q99571 388 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 RABAC1Q9UI14 185 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 OR2W1Q9Y3N9 320 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 CD200P41217 278 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 PAX5Q02548 391 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 PARP11Q9NR21 331 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 ZNF716A6NP11 495 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 PPYP01298 95 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 TTRP02766 147 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 MMP7P09237 267 aaPredicted RBP11.13□□□□□ -0.63
NUP58-206ENST00000463407 VSIG8P0DPA2 414 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 MMP16P51512 607 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 RAG2P55895 527 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 SLC35B1P78383 322 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 SLC25A47Q6Q0C1 308 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 CLEC18BQ6UXF7 455 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 ZNF826PQ6ZT77 177 aa11.13□□□□□ -0.63
NUP58-206ENST00000463407 A0A1W2PNV4 684 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 ICMTO60725 284 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 CA11O75493 328 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 B3GALNT1O75752 331 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 HOXB1P14653 301 aaPredicted RBP11.12□□□□□ -0.63
NUP58-206ENST00000463407 DYNLT3P51808 116 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 RBM11P57052 281 aaKnown RBP11.12□□□□□ -0.63
NUP58-206ENST00000463407 LINC00052Q96N35 136 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 IGHV3-21A0A0B4J1V1 117 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 FABP9Q0Z7S8 132 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 ATP6V1FQ16864 119 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 PRSS54Q6PEW0 395 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 ZNF429Q86V71 674 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 V9GYH0 126 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 RNASEK-C17orf49H0YIS7 233 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 LIMS1P48059 325 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 POLR2GP62487 172 aaKnown RBP eCLIP11.12□□□□□ -0.63
NUP58-206ENST00000463407 SURF2Q15527 256 aaPredicted RBP11.12□□□□□ -0.63
NUP58-206ENST00000463407 MYPOPQ86VE0 399 aaPredicted RBP11.12□□□□□ -0.63
NUP58-206ENST00000463407 ARPC4-TTLL3A0A0A6YYG9 625 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 ADAM10O14672 748 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 GAPDHP04406 335 aaKnown RBP11.12□□□□□ -0.63
NUP58-206ENST00000463407 INHBBP09529 407 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 CSRP1P21291 193 aaKnown RBP11.12□□□□□ -0.63
NUP58-206ENST00000463407 LOXL3P58215 753 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 AANATQ16613 207 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 OR8G5Q8NG78 346 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 FOXD3Q9UJU5 478 aaPredicted RBP11.12□□□□□ -0.63
NUP58-206ENST00000463407 A0A0U1RQV5 110 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 ADAP1O75689 374 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 S100A8P05109 93 aa11.12□□□□□ -0.63
NUP58-206ENST00000463407 GAR1Q9NY12 217 aaKnown RBP11.12□□□□□ -0.63
NUP58-206ENST00000463407 RAB29O14966 203 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 CDC34P49427 236 aaPredicted RBP11.11□□□□□ -0.63
NUP58-206ENST00000463407 MIOXQ9UGB7 285 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 MGST3O14880 152 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 NQO2P16083 231 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 NANOS3P60323 173 aaKnown RBP11.11□□□□□ -0.63
NUP58-206ENST00000463407 OR10G4Q8NGN3 311 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 OR10G9Q8NGN4 311 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 OR10G7Q8NGN6 311 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 A0A1W2PPQ1 181 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 GUK1Q16774 197 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 TMEM91Q6ZNR0 172 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 DTD1Q8TEA8 209 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 MRPS18AQ9NVS2 196 aaKnown RBP11.11□□□□□ -0.63
NUP58-206ENST00000463407 IGHV3-72A0A0B4J1Y9 119 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 CLEC9AQ6UXN8 241 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 PDPNQ86YL7 162 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 MUC15Q8N387 334 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 MED19A0JLT2 244 aaPredicted RBP11.11□□□□□ -0.63
NUP58-206ENST00000463407 MAP1LC3B2A6NCE7 125 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 C4orf17Q53FE4 359 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 SLC25A42Q86VD7 318 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 HDHD3Q9BSH5 251 aaPredicted RBP11.11□□□□□ -0.63
NUP58-206ENST00000463407 MAP1LC3BQ9GZQ8 125 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 MIXL1Q9H2W2 232 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 MMP26Q9NRE1 261 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 OR51B2Q9Y5P1 312 aa11.11□□□□□ -0.63
NUP58-206ENST00000463407 ZNF737O75373 536 aa11.1□□□□□ -0.63
NUP58-206ENST00000463407 EFNB2P52799 333 aa11.1□□□□□ -0.63
NUP58-206ENST00000463407 PERPQ96FX8 193 aa11.1□□□□□ -0.63
NUP58-206ENST00000463407 RNF2Q99496 336 aa11.1□□□□□ -0.63
NUP58-206ENST00000463407 LTBP1Q14766 1721 aa11.1□□□□□ -0.63
NUP58-206ENST00000463407 SYNGR2O43760 224 aa11.1□□□□□ -0.63
NUP58-206ENST00000463407 TXNDC12O95881 172 aa11.1□□□□□ -0.63
NUP58-206ENST00000463407 SIGLECL1Q8N7X8 197 aa11.1□□□□□ -0.63
NUP58-206ENST00000463407 OR1L8Q8NGR8 309 aa11.1□□□□□ -0.63
NUP58-206ENST00000463407 RBM38Q9H0Z9 239 aaKnown RBP11.1□□□□□ -0.63
NUP58-206ENST00000463407 LY6EQ16553 131 aa11.1□□□□□ -0.63
NUP58-206ENST00000463407 DHRS7BQ6IAN0 325 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms