RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 LYL1P12980 280 aa10.78□□□□□ -0.68
VAPB-203ENST00000463370 GLRXP35754 106 aa10.78□□□□□ -0.68
VAPB-203ENST00000463370 FAM74A1Q5RGS3 127 aa10.78□□□□□ -0.68
VAPB-203ENST00000463370 H1FOOQ8IZA3 346 aaPredicted RBP10.78□□□□□ -0.68
VAPB-203ENST00000463370 OR10J5Q8NHC4 309 aa10.78□□□□□ -0.68
VAPB-203ENST00000463370 CXorf58Q96LI9 332 aa10.78□□□□□ -0.68
VAPB-203ENST00000463370 ZNF471Q9BX82 626 aaPredicted RBP10.78□□□□□ -0.68
VAPB-203ENST00000463370 SUCNR1Q9BXA5 334 aa10.78□□□□□ -0.68
VAPB-203ENST00000463370 TREM2Q9NZC2 230 aa10.78□□□□□ -0.68
VAPB-203ENST00000463370 PCDHB10Q9UN67 800 aa10.78□□□□□ -0.68
VAPB-203ENST00000463370 CHD8Q9HCK8 2581 aa10.78□□□□□ -0.68
VAPB-203ENST00000463370 KANTRA0A1W2PQU2 76 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.77□□□□□ -0.68
VAPB-203ENST00000463370 ATXN7O15265 892 aaPredicted RBP10.77□□□□□ -0.68
VAPB-203ENST00000463370 CTXN2P0C2S0 81 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 CD40P25942 277 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 MDH2P40926 338 aaKnown RBP10.77□□□□□ -0.68
VAPB-203ENST00000463370 AESQ08117 197 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 SHEQ5VZ18 495 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 MRGPRGQ86SM5 289 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 TPRX1Q8N7U7 411 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 SLC35G3Q8N808 338 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 LRTM2Q8N967 370 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 ZNF565Q8N9K5 539 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 LRRC29Q8WV35 223 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 MRPL37Q9BZE1 423 aaKnown RBP10.77□□□□□ -0.68
VAPB-203ENST00000463370 MBNL3Q9NUK0 354 aaKnown RBP10.77□□□□□ -0.68
VAPB-203ENST00000463370 TAAR3PQ9P1P4 343 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 ERRFI1Q9UJM3 462 aaPredicted RBP10.77□□□□□ -0.68
VAPB-203ENST00000463370 AUP1Q9Y679 476 aa10.77□□□□□ -0.68
VAPB-203ENST00000463370 NCOR2Q9Y618 2525 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 TEX46H3BTG2 121 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 GPR31O00270 319 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 SPRY3O43610 288 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 IGLV2-14P01704 120 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 LMO1P25800 156 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 KLF3P57682 345 aaPredicted RBP10.77□□□□□ -0.69
VAPB-203ENST00000463370 TESK1Q15569 626 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 C1orf174Q8IYL3 243 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 CCDC71LQ8N9Z2 235 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 SPERTQ8NA61 448 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 OR52M1Q8NGK5 317 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 SCARB1Q8WTV0 552 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 COQ2Q96H96 371 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 OR2V2Q96R30 315 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 TAF9BQ9HBM6 251 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 TUBD1Q9UJT1 453 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 OR2W1Q9Y3N9 320 aa10.77□□□□□ -0.69
VAPB-203ENST00000463370 SCGB1D2O95969 90 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 IFNA21P01568 189 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 THBDP07204 575 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 RAB14P61106 215 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 COL10A1Q03692 680 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 C3orf36Q3SXR2 165 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 TMEM268Q5VZI3 342 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 CD177Q8N6Q3 437 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 BOLLQ8N9W6 283 aaKnown RBP10.76□□□□□ -0.69
VAPB-203ENST00000463370 CNTNAP3BQ96NU0 1288 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 CNTNAP3Q9BZ76 1288 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 TMEM222Q9H0R3 208 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 PIGMQ9H3S5 423 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 KIF25Q9UIL4 384 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 WIPI2Q9Y4P8 454 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 ZGRF1Q86YA3 2104 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 IGLV3-9A0A075B6K5 115 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 F5H0A9 414 aaPredicted RBP10.76□□□□□ -0.69
VAPB-203ENST00000463370 C16orf97H3BN30 126 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 H7C1Q1 480 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 MBPP02686 304 aaPredicted RBP10.76□□□□□ -0.69
VAPB-203ENST00000463370 CD200P41217 278 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 OR3A1P47881 315 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 FIP1L1Q6UN15 594 aaKnown RBP10.76□□□□□ -0.69
VAPB-203ENST00000463370 COMMD7Q86VX2 200 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 WFDC8Q8IUA0 241 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 LGI3Q8N145 548 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 LILRB1Q8NHL6 650 aaPredicted RBP10.76□□□□□ -0.69
VAPB-203ENST00000463370 SHARPINQ9H0F6 387 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 CYTL1Q9NRR1 136 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 JKAMPQ9P055 326 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 SPEF1Q9Y4P9 236 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 LSM5Q9Y4Y9 91 aaKnown RBP10.76□□□□□ -0.69
VAPB-203ENST00000463370 SPTA1P02549 2419 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 ATRXP46100 2492 aa10.76□□□□□ -0.69
VAPB-203ENST00000463370 IGHV3OR15-7A0A075B7D8 119 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 PGLYRP1O75594 196 aaPredicted RBP10.75□□□□□ -0.69
VAPB-203ENST00000463370 RND3P61587 244 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 UBA52P62987 128 aaKnown RBP10.75□□□□□ -0.69
VAPB-203ENST00000463370 HMGN3Q15651 99 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 MOGAT3Q86VF5 341 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 GCSAMQ8N6F7 178 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 OR1L1Q8NH94 360 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 MEGF10Q96KG7 1140 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 ARPC5LQ9BPX5 153 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 HEATR1Q9H583 2144 aaKnown RBP10.75□□□□□ -0.69
VAPB-203ENST00000463370 C12orf77C9JDV5 145 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 DEDDO75618 318 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 GLIPR1P48060 266 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 SMIM21Q3B7S5 101 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 ESCO2Q56NI9 601 aa10.75□□□□□ -0.69
VAPB-203ENST00000463370 FAM201AQ5SY85 155 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms