RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 ORC5O43913 435 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 FBXO24O75426 580 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 GLAP06280 429 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 CGB3P0DN86 165 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 CGB7P0DN87 165 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 MGMTP16455 207 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 MYF6P23409 242 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 PSMA1P25786 263 aaKnown RBP10.53□□□□□ -0.72
HDAC1-203ENST00000463172 IL3RAP26951 378 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 GDNFP39905 211 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 VDAC2P45880 294 aaPredicted RBP10.53□□□□□ -0.72
HDAC1-203ENST00000463172 RAB7AP51149 207 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 LTC4SQ16873 150 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 RBM48Q5RL73 367 aaKnown RBP10.53□□□□□ -0.72
HDAC1-203ENST00000463172 LDLRAD2Q5SZI1 272 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 CCBE1Q6UXH8 406 aaPredicted RBP10.53□□□□□ -0.72
HDAC1-203ENST00000463172 OR52M1Q8NGK5 317 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 RFESDQ8TAC1 157 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 ARL11Q969Q4 196 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 TMED9Q9BVK6 235 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 ANKRD60Q9BZ19 345 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 SELENOIQ9C0D9 397 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 ZNF702PQ9H963 129 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 ETAA1Q9NY74 926 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 TRAPPC2LQ9UL33 140 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 VWFP04275 2813 aa10.53□□□□□ -0.72
HDAC1-203ENST00000463172 MAGEA13PA6NCF6 341 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 ERICH4A6NGS2 130 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 SDCBPO00560 298 aaPredicted RBP10.52□□□□□ -0.73
HDAC1-203ENST00000463172 OR2F2O95006 317 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 FUT3P21217 361 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 SSTR5P35346 364 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 SLC35A2P78381 396 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 EMX1Q04741 257 aaPredicted RBP10.52□□□□□ -0.73
HDAC1-203ENST00000463172 HSD17B12Q53GQ0 312 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 RAB12Q6IQ22 244 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 BAIAP2L2Q6UXY1 529 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 ZNF497Q6ZNH5 498 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 CEACAM19Q7Z692 300 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 OR8H3Q8N146 312 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 RBM14Q96PK6 669 aaKnown RBP10.52□□□□□ -0.73
HDAC1-203ENST00000463172 SLC25A33Q9BSK2 321 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 CCDC90BQ9GZT6 254 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 ISYNA1Q9NPH2 558 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 KCNIP1Q9NZI2 227 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 RCC2Q9P258 522 aaKnown RBP10.52□□□□□ -0.73
HDAC1-203ENST00000463172 PSG11Q9UQ72 335 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 PEX16Q9Y5Y5 336 aa10.52□□□□□ -0.73
HDAC1-203ENST00000463172 LY6LH3BQJ8 138 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 PIN1P1O15428 100 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 ARL6IP5O75915 188 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 MT-ND4P03905 459 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 HSMCR30P0CW71 290 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 GNG10P50151 68 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 Q3ZCU0 254 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 UNQ9370/PRO34162Q6UXP9 181 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 THNSL2Q86YJ6 484 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 CCDC107Q8WV48 283 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 NRG4Q8WWG1 115 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 CFHR4Q92496 578 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 NEDD4LQ96PU5 975 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 BANF2Q9H503 90 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 DUSP21Q9H596 190 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 MEGF8Q7Z7M0 2845 aa10.51□□□□□ -0.73
HDAC1-203ENST00000463172 A0A1W2PP11 408 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 GAPDHP04406 335 aaKnown RBP10.5□□□□□ -0.73
HDAC1-203ENST00000463172 SRMP19623 302 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 HES1Q14469 280 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 IRF3Q14653 427 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 SYT6Q5T7P8 510 aaPredicted RBP10.5□□□□□ -0.73
HDAC1-203ENST00000463172 LIPKQ5VXJ0 399 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 IZUMO2Q6UXV1 221 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 PRSS48Q7RTY5 328 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 C8orf31Q8N9H6 132 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 KCNG3Q8TAE7 436 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 FAM110DQ8TAY7 271 aaPredicted RBP10.5□□□□□ -0.73
HDAC1-203ENST00000463172 LEAP2Q969E1 77 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 Q96M66 194 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 OR5M11Q96RB7 305 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 SERTAD4Q9NUC0 356 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 GNG12Q9UBI6 72 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 LSM2Q9Y333 95 aaKnown RBP10.5□□□□□ -0.73
HDAC1-203ENST00000463172 MOB4Q9Y3A3 225 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 LRRC42Q9Y546 428 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 NOTCH1P46531 2555 aa10.5□□□□□ -0.73
HDAC1-203ENST00000463172 TRAV39A0A0B4J263 110 aa10.49□□□□□ -0.73
HDAC1-203ENST00000463172 CCRL2O00421 344 aa10.49□□□□□ -0.73
HDAC1-203ENST00000463172 HSD17B6O14756 317 aa10.49□□□□□ -0.73
HDAC1-203ENST00000463172 TXNL1O43396 289 aa10.49□□□□□ -0.73
HDAC1-203ENST00000463172 PDCD6O75340 191 aa10.49□□□□□ -0.73
HDAC1-203ENST00000463172 BPNT1O95861 308 aa10.49□□□□□ -0.73
HDAC1-203ENST00000463172 MPIG6BO95866 241 aa10.49□□□□□ -0.73
HDAC1-203ENST00000463172 IGHV3-7P01780 117 aa10.49□□□□□ -0.73
HDAC1-203ENST00000463172 JUNBP17275 347 aaPredicted RBP10.49□□□□□ -0.73
HDAC1-203ENST00000463172 CD24P25063 80 aa10.49□□□□□ -0.73
HDAC1-203ENST00000463172 HTR2CP28335 458 aa10.49□□□□□ -0.73
HDAC1-203ENST00000463172 BLCAPP62952 87 aa10.49□□□□□ -0.73
HDAC1-203ENST00000463172 MLLT11Q13015 90 aaPredicted RBP10.49□□□□□ -0.73
HDAC1-203ENST00000463172 TPBGQ13641 420 aa10.49□□□□□ -0.73
HDAC1-203ENST00000463172 HABP2Q14520 560 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms