RNA–Protein interactions for RNA: ENST00000462637.5

PCCB-204, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-204ENST00000462637 DUX4L3P0CJ86 424 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 DUX4L4P0CJ87 422 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 DUX4L5P0CJ88 424 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 DUX4L6P0CJ89 424 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 DUX4L7P0CJ90 424 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 RPA2P15927 270 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 CXCL2P19875 107 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 ASCL1P50553 236 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 OPCMLQ14982 345 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 HERPUD1Q15011 391 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 C20orf204Q6ZNR8 217 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 PLPPR1Q8TBJ4 325 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 PPP1R1CQ8WVI7 109 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 MEGF10Q96KG7 1140 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 MRPL37Q9BZE1 423 aaKnown RBP13.19□□□□□ -0.3
PCCB-204ENST00000462637 SEBOXQ9HB31 216 aaPredicted RBP13.19□□□□□ -0.3
PCCB-204ENST00000462637 DUX4Q9UBX2 424 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 ZDHHC8Q9ULC8 765 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 WIPI2Q9Y4P8 454 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 TRBV6-7A0A0A0MS04 114 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 TSPAN9O75954 239 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 THBDP07204 575 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 TNFSF4P23510 183 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 C11orf87Q6NUJ2 197 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 OR10J5Q8NHC4 309 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 THAP6Q8TBB0 222 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 KIRREL1Q96J84 757 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 OR2V2Q96R30 315 aa13.19□□□□□ -0.3
PCCB-204ENST00000462637 MAP1BP46821 2468 aaKnown RBP13.19□□□□□ -0.3
PCCB-204ENST00000462637 IGKV1-6A0A0C4DH72 117 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 SRRM5B3KS81 715 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 ABCD4O14678 606 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 IFNA21P01568 189 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 RCC1P18754 421 aaPredicted RBP13.18□□□□□ -0.3
PCCB-204ENST00000462637 PSMB6P28072 239 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 S100A11P31949 105 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 GATA4P43694 442 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 RND3P61587 244 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 ATXN7L3Q14CW9 347 aaPredicted RBP13.18□□□□□ -0.3
PCCB-204ENST00000462637 PHLDA2Q53GA4 152 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 SLC35E4Q6ICL7 350 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 ZNF546Q86UE3 836 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 C2orf50Q96LR7 162 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 MFFQ9GZY8 342 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 MBNL3Q9NUK0 354 aaKnown RBP13.18□□□□□ -0.3
PCCB-204ENST00000462637 KCNIP1Q9NZI2 227 aa13.18□□□□□ -0.3
PCCB-204ENST00000462637 DPRXA6NFQ7 191 aa13.17□□□□□ -0.3
PCCB-204ENST00000462637 VSTM5A8MXK1 200 aa13.17□□□□□ -0.3
PCCB-204ENST00000462637 GPR31O00270 319 aa13.17□□□□□ -0.3
PCCB-204ENST00000462637 SPRY3O43610 288 aa13.17□□□□□ -0.3
PCCB-204ENST00000462637 ADAP1O75689 374 aa13.17□□□□□ -0.3
PCCB-204ENST00000462637 SRPXP78539 464 aa13.17□□□□□ -0.3
PCCB-204ENST00000462637 TMUB2Q71RG4 321 aa13.17□□□□□ -0.3
PCCB-204ENST00000462637 LRTM2Q8N967 370 aa13.17□□□□□ -0.3
PCCB-204ENST00000462637 LILRB1Q8NHL6 650 aaPredicted RBP13.17□□□□□ -0.3
PCCB-204ENST00000462637 SLC5A7Q9GZV3 580 aa13.17□□□□□ -0.3
PCCB-204ENST00000462637 PRR13Q9NZ81 148 aa13.17□□□□□ -0.3
PCCB-204ENST00000462637 IL19Q9UHD0 177 aa13.17□□□□□ -0.3
PCCB-204ENST00000462637 TLN1Q9Y490 2541 aaKnown RBP13.17□□□□□ -0.3
PCCB-204ENST00000462637 A0A0D9SG52 128 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 PSPNO60542 156 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 MPC2O95563 127 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 S100GP29377 79 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 CEBPDP49716 269 aaPredicted RBP13.16□□□□□ -0.3
PCCB-204ENST00000462637 BSPH1Q075Z2 132 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 TMEM187Q14656 261 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 HMGN3Q15651 99 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 LRRC37A5PQ49AS3 106 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 CMTM1Q8IZ96 169 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 H1FOOQ8IZA3 346 aaPredicted RBP13.16□□□□□ -0.3
PCCB-204ENST00000462637 SECTM1Q8WVN6 248 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 ERGIC1Q969X5 290 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 DIRC2Q96SL1 478 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 RDH8Q9NYR8 311 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 FBXO9Q9UK97 447 aaPredicted RBP13.16□□□□□ -0.3
PCCB-204ENST00000462637 OR2W1Q9Y3N9 320 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 MPPED1O15442 326 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 OR2F2O95006 317 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 HOXB5P09067 269 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 OR5AC1P0C628 307 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 PET100P0DJ07 73 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 CHRNB4P30926 498 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 GNRHRP30968 328 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 TNFAIP6P98066 277 aaPredicted RBP13.16□□□□□ -0.3
PCCB-204ENST00000462637 PAX5Q02548 391 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 OR2F1Q13607 317 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 ZNF345Q14585 488 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 LIAT1Q6ZQX7 453 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 MOGAT3Q86VF5 341 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 LGI3Q8N145 548 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 ARL6Q9H0F7 186 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 ZC4H2Q9NQZ6 224 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 DNAJB11Q9UBS4 358 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 TNFSF18Q9UNG2 199 aa13.16□□□□□ -0.3
PCCB-204ENST00000462637 CCL21O00585 134 aa13.15□□□□□ -0.3
PCCB-204ENST00000462637 RP2O75695 350 aa13.15□□□□□ -0.3
PCCB-204ENST00000462637 PRDX2P32119 198 aa13.15□□□□□ -0.3
PCCB-204ENST00000462637 OR3A1P47881 315 aa13.15□□□□□ -0.3
PCCB-204ENST00000462637 COL10A1Q03692 680 aa13.15□□□□□ -0.3
PCCB-204ENST00000462637 FBXL19-AS1Q494R0 122 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms