RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 TGIF2LXQ8IUE1 241 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 CBR4Q8N4T8 237 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 Q8NFD4 153 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 OR52M1Q8NGK5 317 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 OR52N1Q8NH53 320 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 ARL11Q969Q4 196 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 RASL11BQ9BPW5 248 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 JAM3Q9BX67 310 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 AMBNQ9NP70 447 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 LIN7CQ9NUP9 197 aaKnown RBP12.15□□□□□ -0.46
SKA3-204ENST00000462482 TAS2R4Q9NYW5 299 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 AASSQ9UDR5 926 aa12.15□□□□□ -0.46
SKA3-204ENST00000462482 TRAV39A0A0B4J263 110 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 E9PI62 339 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 CCL24O00175 119 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 ZNF780AO75290 641 aaPredicted RBP12.14□□□□□ -0.47
SKA3-204ENST00000462482 CDRT1O95170 752 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 ZNF93P35789 620 aaPredicted RBP12.14□□□□□ -0.47
SKA3-204ENST00000462482 REG1BP48304 166 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 CCDC58Q4VC31 144 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 IZUMO1Q8IYV9 350 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 OR51A2Q8NGJ7 313 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 OR5M8Q8NGP6 311 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 OR8U1Q8NH10 309 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 RHOXF1Q8NHV9 184 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 EAF1Q96JC9 268 aaPredicted RBP12.14□□□□□ -0.47
SKA3-204ENST00000462482 P2RX4Q99571 388 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 C9orf16Q9BUW7 83 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 IFT22Q9H7X7 185 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 TMEM138Q9NPI0 162 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 IL36GQ9NZH8 169 aa12.14□□□□□ -0.47
SKA3-204ENST00000462482 IGHV3-72A0A0B4J1Y9 119 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 TXNL1O43396 289 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 NHLRC4P0CG21 123 aaPredicted RBP12.13□□□□□ -0.47
SKA3-204ENST00000462482 SERPINA2P20848 420 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 VDAC1P21796 283 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 GPR12P47775 334 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 RBM11P57052 281 aaKnown RBP12.13□□□□□ -0.47
SKA3-204ENST00000462482 GPR50Q13585 617 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 EBI3Q14213 229 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 MPV17LQ2QL34 196 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 NHLRC3Q5JS37 347 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 DDI2Q5TDH0 399 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 ZNF529Q6P280 563 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 RPL22L1Q6P5R6 122 aaKnown RBP12.13□□□□□ -0.47
SKA3-204ENST00000462482 ASCL4Q6XD76 172 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 TMPRSS11AQ6ZMR5 421 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 C18orf65Q6ZTR6 163 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 OR8H1Q8NGG4 311 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 OR52I1Q8NGK6 324 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 TFAP2CQ92754 450 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 TMEM106AQ96A25 262 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 ABCG5Q9H222 651 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 SPACA1Q9HBV2 294 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 CKLFQ9UBR5 152 aa12.13□□□□□ -0.47
SKA3-204ENST00000462482 SIRT4Q9Y6E7 314 aaPredicted RBP12.13□□□□□ -0.47
SKA3-204ENST00000462482 H0YHG0 523 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 SPINT2O43291 252 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 ORC5O43913 435 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 MOSP00540 346 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 ELANEP08246 267 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 GTF2F2P13984 249 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 GABRB1P18505 474 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 CD1BP29016 333 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 BDKRB2P30411 391 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 FOXE3Q13461 319 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 GPR176Q14439 515 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 Q3ZCU0 254 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 C9orf66Q5T8R8 295 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 LINC00311Q8N616 119 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 C8orf31Q8N9H6 132 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 CCDC107Q8WV48 283 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 DCLRE1BQ9H816 532 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 GNG12Q9UBI6 72 aa12.12□□□□□ -0.47
SKA3-204ENST00000462482 LOC100130705A0A1B0GUX0 176 aa12.11□□□□□ -0.47
SKA3-204ENST00000462482 AIPO00170 330 aa12.11□□□□□ -0.47
SKA3-204ENST00000462482 GEMIN2O14893 280 aaKnown RBP12.11□□□□□ -0.47
SKA3-204ENST00000462482 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
SKA3-204ENST00000462482 OR5H8P0DN80 308 aa12.11□□□□□ -0.47
SKA3-204ENST00000462482 VSIG8P0DPA2 414 aa12.11□□□□□ -0.47
SKA3-204ENST00000462482 CDX1P47902 265 aaPredicted RBP12.11□□□□□ -0.47
SKA3-204ENST00000462482 GTF2A1P52655 376 aaPredicted RBP12.11□□□□□ -0.47
SKA3-204ENST00000462482 RIPK1Q13546 671 aa12.11□□□□□ -0.47
SKA3-204ENST00000462482 TMEM30BQ3MIR4 351 aa12.11□□□□□ -0.47
SKA3-204ENST00000462482 LCNL1Q6ZST4 164 aa12.11□□□□□ -0.47
SKA3-204ENST00000462482 RTN4IP1Q8WWV3 396 aaPredicted RBP12.11□□□□□ -0.47
SKA3-204ENST00000462482 RAX2Q96IS3 184 aa12.11□□□□□ -0.47
SKA3-204ENST00000462482 DUX3Q96PT4 197 aa12.11□□□□□ -0.47
SKA3-204ENST00000462482 MRPS18AQ9NVS2 196 aaKnown RBP12.11□□□□□ -0.47
SKA3-204ENST00000462482 GFOD1Q9NXC2 390 aa12.11□□□□□ -0.47
SKA3-204ENST00000462482 TRAPPC2LQ9UL33 140 aa12.11□□□□□ -0.47
SKA3-204ENST00000462482 IGHV3-43A0A0B4J1X8 118 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 IRGMA1A4Y4 181 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 MCRIP1C9JLW8 97 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 IGHV3-43DP0DP04 118 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 DCKP27707 260 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 SOX6P35712 828 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 MED21Q13503 144 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 KIR2DS1Q14954 304 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 SLC22A6Q4U2R8 563 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms