RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 LINC01560Q8TB33 94 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 RTN4IP1Q8WWV3 396 aaPredicted RBP5.73□□□□□ -1.49
MSH2-204ENST00000461394 RNASE6Q93091 150 aaKnown RBP5.73□□□□□ -1.49
MSH2-204ENST00000461394 WDR89Q96FK6 387 aaPredicted RBP5.73□□□□□ -1.49
MSH2-204ENST00000461394 KIRREL1Q96J84 757 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 OR2A7Q96R45 310 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 GON7Q9BXV9 100 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 TLNRD1Q9H1K6 362 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 NAA60Q9H7X0 242 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 KCNJ16Q9NPI9 418 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 DECR2Q9NUI1 292 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 TREM2Q9NZC2 230 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 GSKIPQ9P0R6 139 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 RNF7Q9UBF6 113 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 SHPKQ9UHJ6 478 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 OPN4Q9UHM6 478 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 ZDHHC8Q9ULC8 765 aa5.73□□□□□ -1.49
MSH2-204ENST00000461394 UBE2J1Q9Y385 318 aaPredicted RBP5.73□□□□□ -1.49
MSH2-204ENST00000461394 IGLV3-9A0A075B6K5 115 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 TRBV6-6A0A0A6YYG2 114 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 MED19A0JLT2 244 aaPredicted RBP5.72□□□□□ -1.49
MSH2-204ENST00000461394 OOEPA6NGQ2 149 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 CRYM-AS1A6NIL9 109 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 NKX6-3A6NJ46 265 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 LRRC30A6NM36 301 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 CEACAM18A8MTB9 384 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 ADARB2-AS1A8MUL3 147 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 GPR31O00270 319 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 ADAP1O75689 374 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 SNAPC5O75971 98 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 CYB5R3P00387 301 aaPredicted RBP5.72□□□□□ -1.49
MSH2-204ENST00000461394 OR5AC1P0C628 307 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 PF4V1P10720 104 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 TNFRSF1AP19438 455 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 GNRHRP30968 328 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 PRDX2P32119 198 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 OR3A1P47881 315 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 LUMP51884 338 aaPredicted RBP5.72□□□□□ -1.49
MSH2-204ENST00000461394 UCP3P55916 312 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 HOXA4Q00056 320 aaPredicted RBP5.72□□□□□ -1.49
MSH2-204ENST00000461394 IFITM2Q01629 132 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 TLE1Q04724 770 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 AESQ08117 197 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 SMCO1Q147U7 214 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 OPCMLQ14982 345 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 TMEM95Q3KNT9 176 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 SP6Q3SY56 376 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 LY6G6FQ5SQ64 297 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 C6orf183Q5T699 404 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 SHEQ5VZ18 495 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 ZNF660Q6AZW8 331 aaPredicted RBP5.72□□□□□ -1.49
MSH2-204ENST00000461394 LAMTOR1Q6IAA8 161 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 SLC35E4Q6ICL7 350 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 C20orf204Q6ZNR8 217 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 Q6ZPA2 131 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 FOXRED2Q8IWF2 684 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 CMTM1Q8IZ96 169 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 FAM185AQ8N0U4 392 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 LGI3Q8N145 548 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 DEFB108BQ8NET1 73 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 RNASE11Q8TAA1 199 aaKnown RBP5.72□□□□□ -1.49
MSH2-204ENST00000461394 MRGPRDQ8TDS7 321 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 DIRC2Q96SL1 478 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 VRK1Q99986 396 aaPredicted RBP5.72□□□□□ -1.49
MSH2-204ENST00000461394 SUCNR1Q9BXA5 334 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 EGLN1Q9GZT9 426 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 MFFQ9GZY8 342 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 LIME1Q9H400 295 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 TAF9BQ9HBM6 251 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 HES4Q9HCC6 221 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 RAB18Q9NP72 206 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 ZC4H2Q9NQZ6 224 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 SLC2A9Q9NRM0 540 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 IL19Q9UHD0 177 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 KIF25Q9UIL4 384 aa5.72□□□□□ -1.49
MSH2-204ENST00000461394 ERRFI1Q9UJM3 462 aaPredicted RBP5.72□□□□□ -1.49
MSH2-204ENST00000461394 CUL9Q8IWT3 2517 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 C3orf85A0A1B0GTC6 90 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 SRRM5B3KS81 715 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 IFNL4K9M1U5 179 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 SPINT2O43291 252 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 TNFSF12O43508 249 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 PSPNO60542 156 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 RP2O75695 350 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 PET100P0DJ07 73 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 PSG2P11465 335 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 CEACAM6P40199 344 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 KCNJ3P48549 501 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 EDDM3BP56851 147 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 SUPT4H1P63272 117 aaKnown RBP5.71□□□□□ -1.5
MSH2-204ENST00000461394 SRPXP78539 464 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 CCL8P80075 99 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 ADORA2A-AS1P86434 159 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 HERPUD1Q15011 391 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 TESK1Q15569 626 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 ADIPOQQ15848 244 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 LTC4SQ16873 150 aa5.71□□□□□ -1.5
MSH2-204ENST00000461394 IAH1Q2TAA2 248 aaPredicted RBP5.71□□□□□ -1.5
MSH2-204ENST00000461394 LGALSLQ3ZCW2 172 aaPredicted RBP5.71□□□□□ -1.5
MSH2-204ENST00000461394 SPRNQ5BIV9 151 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms