RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 NUBPLQ8TB37 319 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 RNF122Q9H9V4 155 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 MIOXQ9UGB7 285 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 FBLL1A6NHQ2 334 aaKnown RBP7.9□□□□□ -1.14
BRCA1-205ENST00000461221 RAB29O14966 203 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 OGG1O15527 345 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 NUDT3O95989 172 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 MPLP40238 635 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 HMGA2P52926 109 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 RPS20P60866 119 aaKnown RBP7.9□□□□□ -1.14
BRCA1-205ENST00000461221 C21orf62-AS1Q17RA5 79 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 GMPPAQ96IJ6 420 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-205ENST00000461221 TXNDC17Q9BRA2 123 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 SIRT5Q9NXA8 310 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 RCC2Q9P258 522 aaKnown RBP7.9□□□□□ -1.14
BRCA1-205ENST00000461221 MYH4Q9Y623 1939 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 RPL36A-HNRNPH2H7BZ11 118 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 WNT5AP41221 380 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 SLC35B1P78383 322 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 B4GALNT1Q00973 533 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 TMEM183AQ8IXX5 376 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 C1orf174Q8IYL3 243 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 H1FOOQ8IZA3 346 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-205ENST00000461221 OR4B1Q8NGF8 309 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 MAFAQ8NHW3 353 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-205ENST00000461221 ZG16BQ96DA0 208 aa7.9□□□□□ -1.14
BRCA1-205ENST00000461221 MRM2Q9UI43 246 aaKnown RBP7.9□□□□□ -1.14
BRCA1-205ENST00000461221 IGHV1OR21-1A0A087WYE8 117 aa7.9□□□□□ -1.15
BRCA1-205ENST00000461221 J3QR06 171 aa7.9□□□□□ -1.15
BRCA1-205ENST00000461221 WNT9BO14905 357 aa7.9□□□□□ -1.15
BRCA1-205ENST00000461221 RNASE1P07998 156 aaKnown RBP7.9□□□□□ -1.15
BRCA1-205ENST00000461221 MYF5P13349 255 aa7.9□□□□□ -1.15
BRCA1-205ENST00000461221 MMP9P14780 707 aa7.9□□□□□ -1.15
BRCA1-205ENST00000461221 MMDQ15546 238 aa7.9□□□□□ -1.15
BRCA1-205ENST00000461221 PLPPR5Q32ZL2 321 aa7.9□□□□□ -1.15
BRCA1-205ENST00000461221 MRPL24Q96A35 216 aaKnown RBP7.9□□□□□ -1.15
BRCA1-205ENST00000461221 WDR34Q96EX3 536 aa7.9□□□□□ -1.15
BRCA1-205ENST00000461221 RAB33BQ9H082 229 aa7.9□□□□□ -1.15
BRCA1-205ENST00000461221 LEUTXA8MZ59 168 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 NKG7Q16617 165 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 TSPO2Q5TGU0 170 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 CBLN2Q8IUK8 224 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 ZNF441Q8N8Z8 693 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 MEGF10Q96KG7 1140 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 METTL26Q96S19 204 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 TRAF4Q9BUZ4 470 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-205ENST00000461221 RAXQ9Y2V3 346 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 SOX8P57073 446 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 ERVFRD-1P60508 538 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 C17orf47Q8NEP4 570 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 ZNF519Q8TB69 540 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 MRGPRFQ96AM1 343 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 FAM131CQ96AQ9 280 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 A0A1B0GTH9 108 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 DAOP14920 347 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 TMEM50BP56557 158 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 ZNF345Q14585 488 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 INO80CQ6PI98 192 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-205ENST00000461221 PTPMT1Q8WUK0 201 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-205ENST00000461221 VSTM2LQ96N03 204 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 HIST1H4GQ99525 98 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 CLN8Q9UBY8 286 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 TRBV23-1A0A0A0MS06 115 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 NKX2-6A6NCS4 301 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 HPRT1P00492 218 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 RPS4XP62701 263 aaKnown RBP7.89□□□□□ -1.15
BRCA1-205ENST00000461221 SERF2P84101 59 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 INSL4Q14641 139 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 PWWP2BQ6NUJ5 590 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 DEFB124Q8NES8 71 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 GPBAR1Q8TDU6 330 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 OR2H1Q9GZK4 316 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 NTMQ9P121 344 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 CDIPTO14735 213 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 SOCS1O15524 211 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 MFAP2P55001 183 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 SPATA45Q537H7 98 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 RNFT1Q5M7Z0 435 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 DDB2Q92466 427 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 C16orf92Q96LL3 132 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 PRDM14Q9GZV8 571 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 MAP1LC3AQ9H492 121 aa7.89□□□□□ -1.15
BRCA1-205ENST00000461221 IGHV5-51A0A0C4DH38 117 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 FFAR1O14842 300 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 NAT1P18440 290 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 CKS2P33552 79 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 TM4SF20Q53R12 229 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 TEX30Q5JUR7 227 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 NSUN5P2Q63ZY6 315 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 PMCHL2Q9BQD1 86 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 MYH9P35579 1960 aaKnown RBP7.88□□□□□ -1.15
BRCA1-205ENST00000461221 LIPT2A6NK58 231 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 C17orf51A8MQB3 221 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 MPDU1O75352 247 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 CYB5R3P00387 301 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-205ENST00000461221 PATE4P0C8F1 98 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 SPEM2Q0P670 501 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 KLRB1Q12918 225 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 KLF9Q13886 244 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-205ENST00000461221 LSM10Q969L4 123 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms