RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CD200P41217 278 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 EVX1P49640 407 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 MRPS10P82664 201 aaKnown RBP4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 SPIBQ01892 262 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 RASGEF1BQ0VAM2 473 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 GAGE2BQ13066 116 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 MAD2L1BPQ15013 274 aaPredicted RBP4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 MEP1BQ16820 701 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 MS4A18Q3C1V0 323 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 GAGE2EQ4V326 116 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 AKIRIN2Q53H80 203 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 PAPPA-AS1Q5QFB9 102 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 PHYHD1Q5SRE7 291 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 OTUD3Q5T2D3 398 aaPredicted RBP4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 AKR1C8PQ5T2L2 129 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 IDNKQ5T6J7 187 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 RNLSQ5VYX0 342 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 CARD17Q5XLA6 110 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 GAGE2AQ6NT46 116 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 CSPG4Q6UVK1 2322 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 HIST2H3AQ71DI3 136 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 FCRLAQ7L513 359 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 SSX7Q7RTT5 188 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 TCF24Q7RTU0 167 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 ZDHHC21Q8IVQ6 265 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 SLC30A8Q8IWU4 369 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 ZIC4Q8N9L1 334 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 UBAC2Q8NBM4 344 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 BPIFCQ8NFQ6 507 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 OR2AK2Q8NG84 335 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 OR11H7Q8NGC8 314 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 OR9Q2Q8NGE9 314 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 OR52M1Q8NGK5 317 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 OR13C8Q8NGS7 320 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 COQ8AQ8NI60 647 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 SLC7A13Q8TCU3 470 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 ZPLD1Q8TCW7 415 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 RNF128Q8TEB7 428 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 TSEN15Q8WW01 171 aaKnown RBP4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 GEMIN6Q8WXD5 167 aaKnown RBP4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 HIST1H2BAQ96A08 127 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 SLC25A28Q96A46 364 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 SPSB1Q96BD6 273 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 STARD4Q96DR4 205 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF479Q96JC4 524 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 PRRC1Q96M27 445 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 TNFRSF13CQ96RJ3 184 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 CNN2Q99439 309 aaKnown RBP4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 FNDC11Q9BVV2 318 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 BARHL1Q9BZE3 327 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 ACTR3CQ9C0K3 210 aaPredicted RBP4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 SLC25A19Q9HC21 320 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 MED29Q9NX70 200 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 CNOT2Q9NZN8 540 aaKnown RBP4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 RCC2Q9P258 522 aaKnown RBP4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 B3GAT1Q9P2W7 334 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 GAGE2DQ9UEU5 116 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 FBXL3Q9UKT7 428 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 SAMD4AQ9UPU9 718 aaKnown RBP4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 PSG11Q9UQ72 335 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 ZFP30Q9Y2G7 519 aa4.08□□□□□ -1.76
ATPAF1-203ENST00000460928 TRAV36DV7A0A075B6V5 113 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 A0A0D9SG52 128 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 IGLV5-39A0A0G2JS06 123 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 A0A1B0GUH1 482 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 A0A1W2PR80 420 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 hDV102S1A0JD36 115 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 SERPINE3A8MV23 424 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 MCRIP1C9JLW8 97 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 SMLR1H3BR10 107 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 H7C1C5 153 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 GPR31O00270 319 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 RCBTB2O95199 551 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 CGAP01215 116 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 GCGP01275 180 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 FABP3P05413 133 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 H1F0P07305 194 aaKnown RBP4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 RPA2P15927 270 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 MGMTP16455 207 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 MPZP25189 248 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 AGTR1P30556 359 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 GNRHRP30968 328 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 IFNGR2P38484 337 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 MAP2K4P45985 399 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 PITPNBP48739 271 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 THBS3P49746 956 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 FXYD6P3P58550 94 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 LSM6P62312 80 aaKnown RBP4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 LCN6P62502 163 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 SLC35A1P78382 337 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 H3F3AP84243 136 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 GUSBP1Q15486 140 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 SURF2Q15527 256 aaPredicted RBP4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF74Q16587 644 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 TMEM241Q24JQ0 296 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 ODF3L2Q3SX64 289 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 PYDC2Q56P42 97 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF613Q6PF04 617 aa4.07□□□□□ -1.76
ATPAF1-203ENST00000460928 NHLRC1Q6VVB1 395 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 188.1 ms