RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 SEC22CQ9BRL7 303 aa14.02□□□□□ -0.16
NELFCD-201ENST00000460601 RIMS4Q9H426 269 aaPredicted RBP14.02□□□□□ -0.16
NELFCD-201ENST00000460601 USP9YO00507 2555 aaPredicted RBP14.02□□□□□ -0.17
NELFCD-201ENST00000460601 TRBV6-6A0A0A6YYG2 114 aa14.02□□□□□ -0.17
NELFCD-201ENST00000460601 TMEM30CPA0ZSE6 113 aa14.02□□□□□ -0.17
NELFCD-201ENST00000460601 TRDCB7Z8K6 153 aa14.02□□□□□ -0.17
NELFCD-201ENST00000460601 FCGR2CP31995 323 aa14.02□□□□□ -0.17
NELFCD-201ENST00000460601 SSTR5P35346 364 aa14.02□□□□□ -0.17
NELFCD-201ENST00000460601 EDDM3BP56851 147 aa14.02□□□□□ -0.17
NELFCD-201ENST00000460601 ZNF788Q6ZQV5 615 aa14.02□□□□□ -0.17
NELFCD-201ENST00000460601 OR6F1Q8NGZ6 308 aa14.02□□□□□ -0.17
NELFCD-201ENST00000460601 DACT3Q96B18 629 aaPredicted RBP14.02□□□□□ -0.17
NELFCD-201ENST00000460601 SDSLQ96GA7 329 aa14.02□□□□□ -0.17
NELFCD-201ENST00000460601 RAB1BQ9H0U4 201 aa14.02□□□□□ -0.17
NELFCD-201ENST00000460601 MBNL3Q9NUK0 354 aaKnown RBP14.02□□□□□ -0.17
NELFCD-201ENST00000460601 CENPEQ02224 2701 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 FAM172BPA6NC97 362 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 LGALS8O00214 317 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 RP2O75695 350 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 FXYD4P59646 89 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 HLA-DRB3P79483 266 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 Q6ZS49 121 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 ZNF561Q8N587 486 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 ADAD2Q8NCV1 583 aaKnown RBP14.01□□□□□ -0.17
NELFCD-201ENST00000460601 SNX22Q96L94 193 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 SPOCK3Q9BQ16 436 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 SLC25A21Q9BQT8 299 aaPredicted RBP14.01□□□□□ -0.17
NELFCD-201ENST00000460601 TAF9BQ9HBM6 251 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 OR1A1Q9P1Q5 309 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 ZNF221Q9UK13 617 aa14.01□□□□□ -0.17
NELFCD-201ENST00000460601 TRAV38-1A0A0B4J264 116 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 DHFRP00374 187 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 BTG1P62324 171 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 AVPI1Q5T686 147 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 SLC35E4Q6ICL7 350 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 TMEM17Q86X19 198 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 ZNF665Q9H7R5 613 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 PLEKHF2Q9H8W4 249 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 KIR2DS1A0A191URI9 304 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 ANKRD34BA5PLL1 514 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 C12orf77C9JDV5 145 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 GLP1RP43220 463 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 KIR2DS4P43632 304 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 UBE2MP61081 183 aaKnown RBP14□□□□□ -0.17
NELFCD-201ENST00000460601 KIR2DS1Q14954 304 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 TOMM40LQ969M1 308 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 TMEM246Q9BRR3 403 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 GHITMQ9H3K2 345 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 C5orf66Q9H5L9 145 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 CTSZQ9UBR2 303 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 SLC23A1Q9UHI7 598 aa14□□□□□ -0.17
NELFCD-201ENST00000460601 A8MV72 311 aaPredicted RBP13.99□□□□□ -0.17
NELFCD-201ENST00000460601 SIGLEC5O15389 551 aa13.99□□□□□ -0.17
NELFCD-201ENST00000460601 DAOP14920 347 aa13.99□□□□□ -0.17
NELFCD-201ENST00000460601 SRSF7Q16629 238 aaKnown RBP eCLIP13.99□□□□□ -0.17
NELFCD-201ENST00000460601 SP5Q6BEB4 398 aaPredicted RBP13.99□□□□□ -0.17
NELFCD-201ENST00000460601 DHRS11Q6UWP2 260 aa13.99□□□□□ -0.17
NELFCD-201ENST00000460601 SLC36A1Q7Z2H8 476 aa13.99□□□□□ -0.17
NELFCD-201ENST00000460601 OR1L1Q8NH94 360 aa13.99□□□□□ -0.17
NELFCD-201ENST00000460601 RFESDQ8TAC1 157 aa13.99□□□□□ -0.17
NELFCD-201ENST00000460601 NRGNQ92686 78 aa13.99□□□□□ -0.17
NELFCD-201ENST00000460601 SPG11Q96JI7 2443 aa13.99□□□□□ -0.17
NELFCD-201ENST00000460601 MGST3O14880 152 aa13.99□□□□□ -0.17
NELFCD-201ENST00000460601 AADACP22760 399 aa13.99□□□□□ -0.17
NELFCD-201ENST00000460601 IL13RA1P78552 427 aa13.99□□□□□ -0.17
NELFCD-201ENST00000460601 PARP12Q9H0J9 701 aaKnown RBP13.99□□□□□ -0.17
NELFCD-201ENST00000460601 HELZ2Q9BYK8 2649 aaKnown RBP13.99□□□□□ -0.17
NELFCD-201ENST00000460601 ODAMA1E959 279 aa13.98□□□□□ -0.17
NELFCD-201ENST00000460601 C7orf66A4D0T2 115 aa13.98□□□□□ -0.17
NELFCD-201ENST00000460601 H7C1Q1 480 aa13.98□□□□□ -0.17
NELFCD-201ENST00000460601 AKR1C4P17516 323 aa13.98□□□□□ -0.17
NELFCD-201ENST00000460601 KCNJ3P48549 501 aa13.98□□□□□ -0.17
NELFCD-201ENST00000460601 RAG2P55895 527 aa13.98□□□□□ -0.17
NELFCD-201ENST00000460601 GLDNQ6ZMI3 551 aaPredicted RBP13.98□□□□□ -0.17
NELFCD-201ENST00000460601 LDLRAD3Q86YD5 345 aa13.98□□□□□ -0.17
NELFCD-201ENST00000460601 FXYD6Q9H0Q3 95 aa13.98□□□□□ -0.17
NELFCD-201ENST00000460601 TNFRSF13BO14836 293 aaPredicted RBP13.97□□□□□ -0.17
NELFCD-201ENST00000460601 ADAM20O43506 726 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 OMGP23515 440 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 MECP2P51608 486 aaKnown RBP13.97□□□□□ -0.17
NELFCD-201ENST00000460601 P2RX3P56373 397 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 HMGN3Q15651 99 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 C4orf46Q504U0 113 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 MOB1BQ7L9L4 216 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 TCF23Q7RTU1 214 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 OR4A4PQ8NGN8 299 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 RTBDNQ9BSG5 229 aaPredicted RBP13.97□□□□□ -0.17
NELFCD-201ENST00000460601 SEBOXQ9HB31 216 aaPredicted RBP13.97□□□□□ -0.17
NELFCD-201ENST00000460601 GPR132Q9UNW8 380 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 IGKV1D-13A0A0B4J2D9 117 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 J3QKU1 62 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 PPYP01298 95 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 HBZP02008 142 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 OR4E1P0C645 316 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 IGKV1-13P0DP09 117 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 NDUFB7P17568 137 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 PAX5Q02548 391 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 LTC4SQ16873 150 aa13.97□□□□□ -0.17
NELFCD-201ENST00000460601 PEG10Q86TG7 708 aaKnown RBP13.97□□□□□ -0.17
NELFCD-201ENST00000460601 TMEM230Q96A57 120 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms