RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 OCMP0CE72 109 aaPredicted RBP2.06□□□□□ -2.08
VBP1-202ENST00000460509 CGB3P0DN86 165 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 CGB7P0DN87 165 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 ELK4P28324 431 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 GCLMP48507 274 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 TTPAP49638 278 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 TRIP13Q15645 432 aaPredicted RBP2.06□□□□□ -2.08
VBP1-202ENST00000460509 GOLGA7BQ2TAP0 167 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 CEACAM21Q3KPI0 293 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 LAIR2Q6ISS4 152 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 MRPL52Q86TS9 123 aaKnown RBP2.06□□□□□ -2.08
VBP1-202ENST00000460509 PLCZ1Q86YW0 608 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 OR4K17Q8NGC6 315 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 ITFG2Q969R8 447 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 HBEGFQ99075 208 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 PAIP2Q9BPZ3 127 aaKnown RBP2.06□□□□□ -2.08
VBP1-202ENST00000460509 C7orf50Q9BRJ6 194 aaKnown RBP2.06□□□□□ -2.08
VBP1-202ENST00000460509 TSSK6Q9BXA6 273 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 C1orf109Q9NX04 203 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 FBXL3Q9UKT7 428 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 BTRCQ9Y297 605 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 SNX24Q9Y343 169 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 ABCB11O95342 1321 aa2.06□□□□□ -2.08
VBP1-202ENST00000460509 A0A1B0GX12 115 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 CDIPTO14735 213 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 SLC31A1O15431 190 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 SHOX2O60902 331 aaPredicted RBP2.05□□□□□ -2.08
VBP1-202ENST00000460509 POP7O75817 140 aaKnown RBP2.05□□□□□ -2.08
VBP1-202ENST00000460509 GPR75O95800 540 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 CTLA4P16410 223 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 CBX5P45973 191 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 OR10A3P58181 314 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 HBG1P69891 147 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 HBG2P69892 147 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 TRAM1Q15629 374 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 EXOC3L4Q17RC7 722 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 BSXQ3C1V8 233 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 TIMM23BQ5SRD1 257 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 ELP2Q6IA86 826 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 HS3ST5Q8IZT8 346 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 GATD1Q8NB37 220 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 OR2AE1Q8NHA4 323 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 RNASEH2CQ8TDP1 164 aaKnown RBP2.05□□□□□ -2.08
VBP1-202ENST00000460509 PYURFQ96I23 114 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 PITX2Q99697 317 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 ZNF426Q9BUY5 554 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 SPZ1Q9BXG8 430 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 KCNIP2Q9NS61 270 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 MRPL16Q9NX20 251 aaKnown RBP2.05□□□□□ -2.08
VBP1-202ENST00000460509 ADCY9O60503 1353 aa2.05□□□□□ -2.08
VBP1-202ENST00000460509 A0A1W2PNM2 257 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 OR5H14A6NHG9 310 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 SULT1C2O00338 296 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 CRXO43186 299 aaPredicted RBP2.04□□□□□ -2.08
VBP1-202ENST00000460509 ZNF73O43830 326 aaPredicted RBP2.04□□□□□ -2.08
VBP1-202ENST00000460509 ADAP1O75689 374 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 PDYNP01213 254 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 GUSBP08236 651 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 SLC2A1P11166 492 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 CNTFRP26992 372 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 RPL14P50914 215 aaKnown RBP2.04□□□□□ -2.08
VBP1-202ENST00000460509 CD164Q04900 197 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 CASP8Q14790 479 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 CST6Q15828 149 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 RBM48Q5RL73 367 aaKnown RBP2.04□□□□□ -2.08
VBP1-202ENST00000460509 SSX7Q7RTT5 188 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 FUNDC1Q8IVP5 155 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 SPICQ8N5J4 248 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 OR8J2Q8NGG1 315 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 DNAJB3Q8WWF6 145 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 IFT81Q8WYA0 676 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 NUP205Q92621 2012 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 PARD6GQ9BYG4 376 aaPredicted RBP2.04□□□□□ -2.08
VBP1-202ENST00000460509 IFT46Q9NQC8 304 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 OR5V1Q9UGF6 321 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 USH1CQ9Y6N9 552 aa2.04□□□□□ -2.08
VBP1-202ENST00000460509 PCNX2A6NKB5 2137 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 PLB1Q6P1J6 1458 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 IGHV1-45A0A0A0MS14 117 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 A0A0A6YYH2 397 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 GOLGA6L10A6NI86 522 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 A6NJ64 397 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 ARGFXA6NJG6 315 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 I3L4J1 428 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 J3QLI3 93 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 LIN7AO14910 233 aaPredicted RBP2.03□□□□□ -2.08
VBP1-202ENST00000460509 UBDO15205 165 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 EEF1E1O43324 174 aaKnown RBP2.03□□□□□ -2.08
VBP1-202ENST00000460509 CYTH3O43739 400 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 GYPCP04921 128 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 HOXA6P31267 233 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 GTF2H1P32780 548 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 CDC34P49427 236 aaPredicted RBP2.03□□□□□ -2.08
VBP1-202ENST00000460509 AQP5P55064 265 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 ZNHIT3Q15649 155 aaPredicted RBP2.03□□□□□ -2.08
VBP1-202ENST00000460509 TMEM249Q2WGJ8 235 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 COQ5Q5HYK3 327 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 NIPAL1Q6NVV3 410 aa2.03□□□□□ -2.08
VBP1-202ENST00000460509 FAM151BQ6UXP7 276 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms