RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 C12orf77C9JDV5 145 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 C15orf65H3BRN8 121 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 MFNGO00587 321 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 MT-ND4P03905 459 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 GLAP06280 429 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 CGB3P0DN86 165 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 CGB7P0DN87 165 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 RANBP1P43487 201 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 UBE2E1P51965 193 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 TMEM50BP56557 158 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 SPCS2Q15005 226 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 LTC4SQ16873 150 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 DEFB112Q30KQ8 113 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 HEPN1Q6WQI6 88 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 C17orf50Q8WW18 174 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 PTX4Q96A99 478 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 DCSTAMPQ9H295 470 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 TMEM133Q9H2Q1 129 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 OCEL1Q9H607 264 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 ZNF286AQ9HBT8 521 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 ESM1Q9NQ30 184 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 PLEKHJ1Q9NW61 149 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 HSF4Q9ULV5 492 aa10.45□□□□□ -0.74
COL18A1-206ENST00000459895 A0A075B6Q4 140 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 MEIOCA2RUB1 952 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 DNAJC9-AS1A6NH13 148 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 RAB27BO00194 218 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 CA11O75493 328 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 NAPSAO96009 420 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 HIST1H1DP16402 221 aaKnown RBP10.44□□□□□ -0.74
COL18A1-206ENST00000459895 RCC1P18754 421 aaPredicted RBP10.44□□□□□ -0.74
COL18A1-206ENST00000459895 SCAND1P57086 179 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 ZNF626Q68DY1 528 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 USP43Q70EL4 1123 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 OR10R2Q8NGX6 335 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 RAB3CQ96E17 227 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 ATG5Q9H1Y0 275 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 CHMP1AQ9HD42 196 aaPredicted RBP10.44□□□□□ -0.74
COL18A1-206ENST00000459895 C12orf4Q9NQ89 552 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 MBNL3Q9NUK0 354 aaKnown RBP10.44□□□□□ -0.74
COL18A1-206ENST00000459895 IDI2-AS1Q9NZ38 188 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 ZNRD1Q9P1U0 126 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 TRAPPC2LQ9UL33 140 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 KCNK7Q9Y2U2 307 aa10.44□□□□□ -0.74
COL18A1-206ENST00000459895 KIAA2026Q5HYC2 2103 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 NPIPB11E5RHQ5 1161 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 H3BUI4 141 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 TCF21O43680 179 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 ARG1P05089 322 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 GNB3P16520 340 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 NFYBP25208 207 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 PAX6P26367 422 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 HILS1P60008 231 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 LDLRAD2Q5SZI1 272 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 C6orf183Q5T699 404 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 FAM53AQ6NSI3 398 aaPredicted RBP10.43□□□□□ -0.74
COL18A1-206ENST00000459895 MOB1BQ7L9L4 216 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 C5orf24Q7Z6I8 188 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 LHFPL4Q7Z7J7 247 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 CROCCP3Q8IVE0 287 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 PRR18Q8N4B5 295 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 OR13D1Q8NGV5 346 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 RFESDQ8TAC1 157 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 RAB2BQ8WUD1 216 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 LEAP2Q969E1 77 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 ISOC1Q96CN7 298 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 AJUBAQ96IF1 538 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 CLEC7AQ9BXN2 247 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 RBM38Q9H0Z9 239 aaKnown RBP10.43□□□□□ -0.74
COL18A1-206ENST00000459895 HEXA-AS1Q9H8Q6 139 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 LINC00574Q9H8X3 128 aa10.43□□□□□ -0.74
COL18A1-206ENST00000459895 ZMAT3Q9HA38 289 aaKnown RBP10.43□□□□□ -0.74
COL18A1-206ENST00000459895 ELF5Q9UKW6 265 aaPredicted RBP10.43□□□□□ -0.74
COL18A1-206ENST00000459895 A0A087X0M5 115 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 IGHV3-43A0A0B4J1X8 118 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 A0A1B0GX30 115 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 H3BMQ9 156 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 NOL3O60936 208 aaKnown RBP10.42□□□□□ -0.74
COL18A1-206ENST00000459895 VENTXO95231 258 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 IFNA2P01563 188 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 IGHV3-7P01780 117 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 HBZP02008 142 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 IGHV3-43DP0DP04 118 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 FPR2P25090 351 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 CD34P28906 385 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 GNG10P50151 68 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 BPIFB3P59826 476 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 HLA-DRB3P79483 266 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 DYNC1I2Q13409 638 aaKnown RBP10.42□□□□□ -0.74
COL18A1-206ENST00000459895 GNMTQ14749 295 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 HMGN3Q15651 99 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 MIDNQ504T8 468 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 UBE2NLQ5JXB2 153 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 ZNF880Q6PDB4 577 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 Q6ZTK2 550 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 ZNF565Q8N9K5 539 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 OR11H6Q8NGC7 330 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 OR4P4Q8NGL7 312 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 OR1L1Q8NH94 360 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 SETD6Q8TBK2 473 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms