RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 PRR18Q8N4B5 295 aa12.08□□□□□ -0.48
SCFD1-203ENST00000458591 IL22RA1Q8N6P7 574 aa12.08□□□□□ -0.48
SCFD1-203ENST00000458591 PSMF1Q92530 271 aa12.08□□□□□ -0.48
SCFD1-203ENST00000458591 YPEL4Q96NS1 127 aa12.08□□□□□ -0.48
SCFD1-203ENST00000458591 VSIRQ9H7M9 311 aa12.08□□□□□ -0.48
SCFD1-203ENST00000458591 DNPH1O43598 174 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 CYC1P08574 325 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 FGF12P61328 243 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 ID3Q02535 119 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 ICAM4Q14773 271 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 RIPPLY2Q5TAB7 128 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 PCSK4Q6UW60 755 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 CT55Q8WUE5 264 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 IL1F10Q8WWZ1 152 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 GPR146Q96CH1 333 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 PRDM14Q9GZV8 571 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 PLA2G3Q9NZ20 509 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 OR1A1Q9P1Q5 309 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 DMRT1Q9Y5R6 373 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 PRRC2CQ9Y520 2896 aaKnown RBP12.07□□□□□ -0.48
SCFD1-203ENST00000458591 URB1O60287 2271 aaKnown RBP12.07□□□□□ -0.48
SCFD1-203ENST00000458591 HSPA12AO43301 675 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 RHBDL1O75783 438 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 PSG2P11465 335 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 S100A2P29034 98 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 CYB561P49447 251 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 TLE1Q04724 770 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 SPATA46Q5T0L3 261 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 MRPL21Q7Z2W9 205 aaKnown RBP12.07□□□□□ -0.48
SCFD1-203ENST00000458591 SPIN2AQ99865 258 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 SPIN2BQ9BPZ2 258 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 GGACTQ9BVM4 153 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 SLC25A31Q9H0C2 315 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 AHCTF1Q8WYP5 2266 aa12.07□□□□□ -0.48
SCFD1-203ENST00000458591 YKT6O15498 198 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 IAPPP10997 89 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 HOXA5P20719 270 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 TAGLN2P37802 199 aaKnown RBP12.06□□□□□ -0.48
SCFD1-203ENST00000458591 HOXA4Q00056 320 aaPredicted RBP12.06□□□□□ -0.48
SCFD1-203ENST00000458591 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 WDR5BQ86VZ2 330 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 THNSL2Q86YJ6 484 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 ZDHHC23Q8IYP9 409 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 MRPL30Q8TCC3 161 aaKnown RBP12.06□□□□□ -0.48
SCFD1-203ENST00000458591 EDARADDQ8WWZ3 215 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 MUCL1Q96DR8 90 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 RSG1Q9BU20 258 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 FAM86C1Q9NVL1 165 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 LRFN1Q9P244 771 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 ERRFI1Q9UJM3 462 aaPredicted RBP12.06□□□□□ -0.48
SCFD1-203ENST00000458591 ZNF391Q9UJN7 358 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 ASPMQ8IZT6 3477 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 A0A087WWC5 75 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 TGIF2-C20orf24A0A0A6YYL0 155 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 TRAPPC2LH3BP13 241 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 TUSC2O75896 110 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 SCAF4O95104 1147 aaKnown RBP12.06□□□□□ -0.48
SCFD1-203ENST00000458591 UCP1P25874 307 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 UBE2KP61086 200 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 DLK1P80370 383 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 TCEAL6Q6IPX3 200 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 FAM185AQ8N0U4 392 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 Q8WTZ3 238 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 THOC3Q96J01 351 aaKnown RBP12.06□□□□□ -0.48
SCFD1-203ENST00000458591 KIAA1456Q9P272 454 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 RNF115Q9Y4L5 304 aa12.06□□□□□ -0.48
SCFD1-203ENST00000458591 NBEAQ8NFP9 2946 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 TRAV24A0A0B4J272 114 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 IFITM10A6NMD0 228 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 SLC34A2O95436 690 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 VDAC1P21796 283 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 CDX1P47902 265 aaPredicted RBP12.05□□□□□ -0.48
SCFD1-203ENST00000458591 FGF8P55075 233 aaPredicted RBP12.05□□□□□ -0.48
SCFD1-203ENST00000458591 ARL16Q0P5N6 197 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 CEACAM21Q3KPI0 293 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 SP5Q6BEB4 398 aaPredicted RBP12.05□□□□□ -0.48
SCFD1-203ENST00000458591 FAM53AQ6NSI3 398 aaPredicted RBP12.05□□□□□ -0.48
SCFD1-203ENST00000458591 FAM180AQ6UWF9 173 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 SSX7Q7RTT5 188 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 ZNF429Q86V71 674 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 Q8NFD4 153 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 IGKV1-39P01597 117 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 IGKV1D-39P04432 117 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 MAGEA5P43359 124 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 ERVFRD-1P60508 538 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 ATP23Q9Y6H3 246 aa12.05□□□□□ -0.48
SCFD1-203ENST00000458591 LHX2P50458 406 aa12.04□□□□□ -0.48
SCFD1-203ENST00000458591 ZNF674Q2M3X9 581 aa12.04□□□□□ -0.48
SCFD1-203ENST00000458591 MPV17LQ2QL34 196 aa12.04□□□□□ -0.48
SCFD1-203ENST00000458591 OR2B11Q5JQS5 317 aa12.04□□□□□ -0.48
SCFD1-203ENST00000458591 NUFIP2Q7Z417 695 aaKnown RBP12.04□□□□□ -0.48
SCFD1-203ENST00000458591 MKXQ8IYA7 352 aa12.04□□□□□ -0.48
SCFD1-203ENST00000458591 CMTM1Q8IZ96 169 aa12.04□□□□□ -0.48
SCFD1-203ENST00000458591 ZNF610Q8N9Z0 462 aa12.04□□□□□ -0.48
SCFD1-203ENST00000458591 OR1K1Q8NGR3 316 aa12.04□□□□□ -0.48
SCFD1-203ENST00000458591 GNPNAT1Q96EK6 184 aaPredicted RBP12.04□□□□□ -0.48
SCFD1-203ENST00000458591 ABHD14BQ96IU4 210 aa12.04□□□□□ -0.48
SCFD1-203ENST00000458591 BCL2L14Q9BZR8 327 aa12.04□□□□□ -0.48
SCFD1-203ENST00000458591 OPA3Q9H6K4 179 aa12.04□□□□□ -0.48
SCFD1-203ENST00000458591 PPP1R3CQ9UQK1 317 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms