RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 FAM166BA8MTA8 275 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 LY86O95711 162 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 METTL15P1P0C7V9 234 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 STARD6P59095 220 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 COL19A1Q14993 1142 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 TUSC5Q8IXB3 177 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 GGACTQ9BVM4 153 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 SLC25A31Q9H0C2 315 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 ZNF665Q9H7R5 613 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 SH2D2AQ9NP31 389 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 FAM86C1Q9NVL1 165 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 DOK5Q9P104 306 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 PPP1R3CQ9UQK1 317 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 SIT1Q9Y3P8 196 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 ZFHX4Q86UP3 3567 aa16.75■□□□□ 0.27
CNEP1R1-203ENST00000458059 TRGC2P03986 189 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 MMP7P09237 267 aaPredicted RBP16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 WDR5BQ86VZ2 330 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 SPIN2AQ99865 258 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 SPIN2BQ9BPZ2 258 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 TAAR3PQ9P1P4 343 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 SVILO95425 2214 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 IFITM10A6NMD0 228 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 TRAPPC2LH3BP13 241 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 HIKESHIQ53FT3 197 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 M1APQ8TC57 530 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 TOLLIPQ9H0E2 274 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 C11orf1Q9H5F2 150 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 OR1A1Q9P1Q5 309 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 PPIHO43447 177 aaKnown RBP16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 LMO1P25800 156 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 ELLP55199 621 aaPredicted RBP16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 IL11RAQ14626 422 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 CLEC12BQ2HXU8 276 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 Q6ZRM9 215 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 SGCZQ96LD1 299 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 NIPSNAP3BQ9BS92 247 aa16.74■□□□□ 0.27
CNEP1R1-203ENST00000458059 RAB2AP61019 212 aa16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 PCBD1P61457 104 aa16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 HOXA4Q00056 320 aaPredicted RBP16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 ELOBQ15370 118 aa16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 PLPPR1Q8TBJ4 325 aa16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 PGLYRP1O75594 196 aaPredicted RBP16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 SERPINE2P07093 398 aa16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 VDAC1P21796 283 aa16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 NMSQ5H8A3 153 aa16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 CCDC54Q8NEL0 328 aa16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 TMEM56Q96MV1 263 aa16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 OR51M1Q9H341 326 aa16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 TMEM56-RWDD3S4R434 201 aa16.73■□□□□ 0.27
CNEP1R1-203ENST00000458059 PDGFBP01127 241 aaPredicted RBP16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 SELEP16581 610 aa16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 PAX9P55771 341 aa16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 PYY3Q5JQD4 70 aa16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 GPR146Q96CH1 333 aa16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 TMPRSS5Q9H3S3 457 aa16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 KIAA1456Q9P272 454 aa16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 KCNS2Q9ULS6 477 aa16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 RHBDL1O75783 438 aa16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 OR2B11Q5JQS5 317 aa16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 ZDHHC23Q8IYP9 409 aa16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 OR10D4PQ8NGN7 298 aa16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 GPR61Q9BZJ8 451 aa16.72■□□□□ 0.27
CNEP1R1-203ENST00000458059 TNRC18O15417 2968 aaPredicted RBP16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 HOXB1P14653 301 aaPredicted RBP16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 RAB1AP62820 205 aa16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 IL36GQ9NZH8 169 aa16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 CACNG5Q9UF02 275 aa16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 NDUFS6O75380 124 aaKnown RBP16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 SRPXP78539 464 aa16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 SSX7Q7RTT5 188 aa16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 PPP1R32Q7Z5V6 425 aa16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 MKXQ8IYA7 352 aa16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 CLDND2Q8NHS1 167 aa16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 PSMF1Q92530 271 aa16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 SSX3Q99909 188 aa16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 C12orf49Q9H741 205 aa16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 RPRMQ9NS64 109 aa16.71■□□□□ 0.27
CNEP1R1-203ENST00000458059 NAPSAO96009 420 aa16.71■□□□□ 0.26
CNEP1R1-203ENST00000458059 MMP9P14780 707 aa16.71■□□□□ 0.26
CNEP1R1-203ENST00000458059 ID3Q02535 119 aa16.71■□□□□ 0.26
CNEP1R1-203ENST00000458059 ZNF880Q6PDB4 577 aa16.71■□□□□ 0.26
CNEP1R1-203ENST00000458059 STX12Q86Y82 276 aa16.71■□□□□ 0.26
CNEP1R1-203ENST00000458059 C1QTNF5Q9BXJ0 243 aa16.71■□□□□ 0.26
CNEP1R1-203ENST00000458059 PLA2G3Q9NZ20 509 aa16.71■□□□□ 0.26
CNEP1R1-203ENST00000458059 SLC34A2O95436 690 aa16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 FGF12P61328 243 aa16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 ARL16Q0P5N6 197 aa16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 FAM53AQ6NSI3 398 aaPredicted RBP16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 BEND4Q6ZU67 534 aa16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 TVP23CQ96ET8 276 aa16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 ADGRG7Q96K78 797 aa16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 WDR1O75083 606 aa16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 S100A2P29034 98 aa16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 CYB561P49447 251 aa16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 HIST1H2AAQ96QV6 131 aa16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 ATP5SQ99766 215 aa16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 TCEAL7Q9BRU2 100 aa16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 RP1L1Q8IWN7 2480 aaPredicted RBP16.7■□□□□ 0.26
CNEP1R1-203ENST00000458059 SIRPB1O00241 398 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms