RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 NEK7Q8TDX7 302 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 ZNF845Q96IR2 970 aaPredicted RBP15.13■□□□□ 0.01
PTPN6-204ENST00000456013 IL36RNQ9UBH0 155 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 TRAPPC2LH3BP13 241 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 SLC33A1O00400 549 aaPredicted RBP15.13■□□□□ 0.01
PTPN6-204ENST00000456013 NTN3O00634 580 aaPredicted RBP15.13■□□□□ 0.01
PTPN6-204ENST00000456013 SLC25A6P12236 298 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 F2RP25116 425 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 GLIPR1P48060 266 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 ERVFRD-1P60508 538 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 ZNF674Q2M3X9 581 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 SLC23A3Q6PIS1 610 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 PCSK4Q6UW60 755 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 STX12Q86Y82 276 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 ZNF610Q8N9Z0 462 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 GTF3AQ92664 365 aaKnown RBP15.13■□□□□ 0.01
PTPN6-204ENST00000456013 RIMS4Q9H426 269 aaPredicted RBP15.13■□□□□ 0.01
PTPN6-204ENST00000456013 CALHM2Q9HA72 323 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 DOK5Q9P104 306 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 TINAGQ9UJW2 476 aa15.13■□□□□ 0.01
PTPN6-204ENST00000456013 LOC102723971A0A1B0GUV8 181 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 IFITM10A6NMD0 228 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 HSPB6O14558 160 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 IGHV3-9P01782 118 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 NDUFA6P56556 154 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 ZFP36L1Q07352 338 aaKnown RBP15.12■□□□□ 0.01
PTPN6-204ENST00000456013 PILRBQ9UKJ0 227 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 PIGBOS1A0A0B4J2F0 54 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 A0A0G2JRQ6 117 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 A0A1B0GU03 582 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 TNFSF12O43508 249 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 IGHEP01854 428 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 S100GP29377 79 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 Q0VFX4 171 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 MRPL21Q7Z2W9 205 aaKnown RBP15.12■□□□□ 0.01
PTPN6-204ENST00000456013 MRPL30Q8TCC3 161 aaKnown RBP15.12■□□□□ 0.01
PTPN6-204ENST00000456013 GPR146Q96CH1 333 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 LINC00470Q9BZP3 86 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 DEPPQ9NTK1 212 aa15.12■□□□□ 0.01
PTPN6-204ENST00000456013 NOSIPQ9Y314 301 aaKnown RBP15.12■□□□□ 0.01
PTPN6-204ENST00000456013 B4DEV8 164 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 MRPL33O75394 65 aaKnown RBP15.11■□□□□ 0.01
PTPN6-204ENST00000456013 IFNA5P01569 189 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 CCNOP22674 350 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 GDF1P27539 372 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 GFRA1P56159 465 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 ARF1P84077 181 aaKnown RBP15.11■□□□□ 0.01
PTPN6-204ENST00000456013 THNSL2Q86YJ6 484 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 RAB40CQ96S21 281 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 DMRT1Q9Y5R6 373 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 TRBV6-6A0A0A6YYG2 114 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 KIAA1324LA8MWY0 1029 aaPredicted RBP15.11■□□□□ 0.01
PTPN6-204ENST00000456013 HLA-DRB3P79483 266 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 LINC00596Q86U02 117 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 H1FOOQ8IZA3 346 aaPredicted RBP15.11■□□□□ 0.01
PTPN6-204ENST00000456013 ZNF295-AS1Q8N0V1 137 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 OR2W1Q9Y3N9 320 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 URGCP-MRPS24S4R325 110 aa15.11■□□□□ 0.01
PTPN6-204ENST00000456013 IGKV3D-15A0A087WSY6 115 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 TGIF2-C20orf24A0A0A6YYL0 155 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 COX5BP10606 129 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 PMS2CLQ68D20 193 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 ZNF324BQ6AW86 544 aaPredicted RBP15.1■□□□□ 0.01
PTPN6-204ENST00000456013 P4HA3Q7Z4N8 544 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 PPP1R32Q7Z5V6 425 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 OR5A2Q8NGI9 324 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 OR13D1Q8NGV5 346 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 APOBEC3DQ96AK3 386 aaPredicted RBP15.1■□□□□ 0.01
PTPN6-204ENST00000456013 PLK3Q9H4B4 646 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 PRDM6Q9NQX0 595 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 GAR1Q9NY12 217 aaKnown RBP15.1■□□□□ 0.01
PTPN6-204ENST00000456013 CFAP54Q96N23 3096 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 C5orf49A4QMS7 147 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 YKT6O15498 198 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 WNT2P09544 360 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 PYY3Q5JQD4 70 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 C20orf204Q6ZNR8 217 aa15.1■□□□□ 0.01
PTPN6-204ENST00000456013 PINLYPA6NC86 204 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 SYNGR1O43759 233 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 SS18L1O75177 396 aaPredicted RBP15.09■□□□□ 0.01
PTPN6-204ENST00000456013 CCL2P13500 99 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 S100A2P29034 98 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 SLC25A24Q6NUK1 477 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 ZNF880Q6PDB4 577 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 BCL2L14Q9BZR8 327 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 CISD1Q9NZ45 108 aaKnown RBP15.09■□□□□ 0.01
PTPN6-204ENST00000456013 FREM1Q5H8C1 2179 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 A0A096LPE4 126 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 A0A1W2PPZ6 126 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 H3BP45 60 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 CYB5BO43169 146 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 HIST1H2BKO60814 126 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 HIST1H2BJP06899 126 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 SERPINE2P07093 398 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 HIST1H2BOP23527 126 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 HIST1H2BBP33778 126 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 CD200P41217 278 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 HIST1H2BDP58876 126 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 HIST1H2BCP62807 126 aa15.09■□□□□ 0.01
PTPN6-204ENST00000456013 HIST2H2BEQ16778 126 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms