RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 AIPO00170 330 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 KCNAB3O43448 404 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 OR2F2O95006 317 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 MGMTP16455 207 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 MED22Q15528 200 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 HIST2H2BDQ6DRA6 164 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 UNQ9370/PRO34162Q6UXP9 181 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 ZNF497Q6ZNH5 498 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 CCDC107Q8WV48 283 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 ARL11Q969Q4 196 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 TMED9Q9BVK6 235 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 SELENOIQ9C0D9 397 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 WNT10AQ9GZT5 417 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 BANF2Q9H503 90 aa16.98■□□□□ 0.31
HMGB3-205ENST00000455596 RCC2Q9P258 522 aaKnown RBP16.98■□□□□ 0.31
HMGB3-205ENST00000455596 LSM2Q9Y333 95 aaKnown RBP16.98■□□□□ 0.31
HMGB3-205ENST00000455596 FAM90A10PA6NDY2 464 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 FAM90A18PA6NE21 464 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 FAM90A16PA6NEW6 464 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 FAM90A20PA6NIJ5 464 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 FAM90A7PA6NKC0 464 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 FAM90A12PA8MX19 464 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 FAM90A5PA8MXJ8 464 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 FAM90A23PA8MXZ1 464 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 H0YHG0 523 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 ORC5O43913 435 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 CRTAPO75718 401 aaPredicted RBP16.97■□□□□ 0.31
HMGB3-205ENST00000455596 FAM90A15PP0C7V4 464 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 FAM90A13PP0C7W8 464 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 FAM90A14PP0C7W9 464 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 FAM90A24PP0C7X0 464 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 MYF6P23409 242 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 SLC35A2P78381 396 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 MADCAM1Q13477 382 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 INSL4Q14641 139 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 RAB12Q6IQ22 244 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 SGCDQ92629 289 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 VCX3BQ9H321 246 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 GHRLQ9UBU3 117 aa16.97■□□□□ 0.31
HMGB3-205ENST00000455596 C15orf65H3BRN8 121 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 MT-ND4P03905 459 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 FAM106CPP0CH98 169 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 CD28P10747 220 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 RAB7AP51149 207 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 GPR50Q13585 617 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 IRF3Q14653 427 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 TMEM95Q3KNT9 176 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 FBLN7Q53RD9 439 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 OR52M1Q8NGK5 317 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 OR10X1Q8NGY0 326 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 WIPF2Q8TF74 440 aaPredicted RBP16.96■□□□□ 0.31
HMGB3-205ENST00000455596 OCSTAMPQ9BR26 566 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 ETAA1Q9NY74 926 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 TRAPPC2LQ9UL33 140 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 PEX16Q9Y5Y5 336 aa16.96■□□□□ 0.31
HMGB3-205ENST00000455596 SDCBPO00560 298 aaPredicted RBP16.95■□□□□ 0.3
HMGB3-205ENST00000455596 ABCA11PQ4W5N1 156 aa16.95■□□□□ 0.3
HMGB3-205ENST00000455596 RBM48Q5RL73 367 aaKnown RBP16.95■□□□□ 0.3
HMGB3-205ENST00000455596 FAM27D1Q5T7N8 215 aa16.95■□□□□ 0.3
HMGB3-205ENST00000455596 THNSL2Q86YJ6 484 aa16.95■□□□□ 0.3
HMGB3-205ENST00000455596 TMEM104Q8NE00 496 aa16.95■□□□□ 0.3
HMGB3-205ENST00000455596 Q96M66 194 aa16.95■□□□□ 0.3
HMGB3-205ENST00000455596 ANKRD60Q9BZ19 345 aa16.95■□□□□ 0.3
HMGB3-205ENST00000455596 CST11Q9H112 138 aa16.95■□□□□ 0.3
HMGB3-205ENST00000455596 PLXNB1O43157 2135 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 A0A1W2PPE3 182 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 A0A1W2PPI3 338 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 ERICH4A6NGS2 130 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 FAM90A9PA6NNJ1 464 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 M0QZK8 103 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 SNRNP70P08621 437 aaKnown RBP16.94■□□□□ 0.3
HMGB3-205ENST00000455596 GP2P55259 537 aaKnown RBP16.94■□□□□ 0.3
HMGB3-205ENST00000455596 DIAPH2-AS1Q14236 149 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 NSUN5P1Q3KNT7 163 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 SYT6Q5T7P8 510 aaPredicted RBP16.94■□□□□ 0.3
HMGB3-205ENST00000455596 GLT8D1Q68CQ7 371 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 OR8H3Q8N146 312 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 LYG1Q8N1E2 194 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 OR4K15Q8NH41 348 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 OR56B4Q8NH76 319 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 UBALD1Q8TB05 177 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 PHYHIPQ92561 330 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 UFD1Q92890 307 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 DUSP21Q9H596 190 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 RAB9BQ9NP90 201 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 GFOD1Q9NXC2 390 aa16.94■□□□□ 0.3
HMGB3-205ENST00000455596 RGS10O43665 173 aa16.93■□□□□ 0.3
HMGB3-205ENST00000455596 CA11O75493 328 aa16.93■□□□□ 0.3
HMGB3-205ENST00000455596 SC5DO75845 299 aa16.93■□□□□ 0.3
HMGB3-205ENST00000455596 GLAP06280 429 aa16.93■□□□□ 0.3
HMGB3-205ENST00000455596 LPLP06858 475 aa16.93■□□□□ 0.3
HMGB3-205ENST00000455596 UBBP0CG47 229 aa16.93■□□□□ 0.3
HMGB3-205ENST00000455596 FUT3P21217 361 aa16.93■□□□□ 0.3
HMGB3-205ENST00000455596 VHLP40337 213 aa16.93■□□□□ 0.3
HMGB3-205ENST00000455596 LOXL3P58215 753 aa16.93■□□□□ 0.3
HMGB3-205ENST00000455596 EMX1Q04741 257 aaPredicted RBP16.93■□□□□ 0.3
HMGB3-205ENST00000455596 HSD17B12Q53GQ0 312 aa16.93■□□□□ 0.3
HMGB3-205ENST00000455596 C6orf183Q5T699 404 aa16.93■□□□□ 0.3
HMGB3-205ENST00000455596 TRAT1Q6PIZ9 186 aa16.93■□□□□ 0.3
HMGB3-205ENST00000455596 CEACAM19Q7Z692 300 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms