RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TMEM210A6NLX4 147 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 B3GALNT1O75752 331 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 NMBP08949 121 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 DUX4L2P0CJ85 424 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 DUX4L3P0CJ86 424 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 DUX4L4P0CJ87 422 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 DUX4L5P0CJ88 424 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 DUX4L6P0CJ89 424 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 DUX4L7P0CJ90 424 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 SRSF4Q08170 494 aaKnown RBP11.56□□□□□ -0.56
CLK3-203ENST00000454830 TIMM23BQ5SRD1 257 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 Q6ZR03 302 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 RFESDQ8TAC1 157 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 TMED6Q8WW62 240 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 PLPPR2Q96GM1 343 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 TAF9BQ9HBM6 251 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 DUX4Q9UBX2 424 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 KIF25Q9UIL4 384 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 IGKV1-6A0A0C4DH72 117 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 PMELP40967 661 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 POM121Q96HA1 1249 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 ABCA4P78363 2273 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 GLAP06280 429 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 SERPINE2P07093 398 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 TPT1P13693 172 aaKnown RBP11.56□□□□□ -0.56
CLK3-203ENST00000454830 OR3A1P47881 315 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 KLF3P57682 345 aaPredicted RBP11.56□□□□□ -0.56
CLK3-203ENST00000454830 ZNF345Q14585 488 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 EIF2S3LQ2VIR3 472 aaKnown RBP11.56□□□□□ -0.56
CLK3-203ENST00000454830 TOR2AQ5JU69 321 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 Q6P435 159 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 MAGT1Q9H0U3 335 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 WRBO00258 174 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 TUSC2O75896 110 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 DOLPP1Q86YN1 238 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 MRGPRDQ8TDS7 321 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 NINJ1Q92982 152 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 CNTNAP3BQ96NU0 1288 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 SFXN3Q9BWM7 321 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 CNTNAP3Q9BZ76 1288 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 WASF3Q9UPY6 502 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 IGHV3OR15-7A0A075B7D8 119 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 FBXO24O75426 580 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 ZNF250P15622 560 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 RPL12P30050 165 aaKnown RBP11.55□□□□□ -0.56
CLK3-203ENST00000454830 CEACAM6P40199 344 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 SNTB1Q13884 538 aaKnown RBP11.55□□□□□ -0.56
CLK3-203ENST00000454830 SMIM21Q3B7S5 101 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 DEFB108BQ8NET1 73 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 LRRC20Q8TCA0 184 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 SDHAF2Q9NX18 166 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 SPTBN1Q01082 2364 aaKnown RBP11.55□□□□□ -0.56
CLK3-203ENST00000454830 H7C1Q1 480 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 PSPNO60542 156 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 TIMP3P35625 211 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 CAV2P51636 162 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 MOGAT3Q86VF5 341 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 OR52M1Q8NGK5 317 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 OR4A4PQ8NGN8 299 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 LHFPL5Q8TAF8 219 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 SNRNP40Q96DI7 357 aaKnown RBP11.55□□□□□ -0.56
CLK3-203ENST00000454830 RSRP1Q9BUV0 290 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 OR2W1Q9Y3N9 320 aa11.55□□□□□ -0.56
CLK3-203ENST00000454830 ZSCAN5BA6NJL1 495 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 UCP3P55916 312 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 NHLH1Q02575 133 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 GNMTQ14749 295 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 FAM76BQ5HYJ3 339 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 TRGV8A0A0C4DH27 118 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 NKX2-6A6NCS4 301 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 LGALS8O00214 317 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 IGLV1-44P01699 117 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 RRASP10301 218 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 AKR1C2P52895 323 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 AANATQ16613 207 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 OR2B11Q5JQS5 317 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 WDR82Q6UXN9 313 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 ZNF808Q8N4W9 903 aaPredicted RBP11.54□□□□□ -0.56
CLK3-203ENST00000454830 RBPMSQ93062 196 aaKnown RBP11.54□□□□□ -0.56
CLK3-203ENST00000454830 GALNT14Q96FL9 552 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 OR2V2Q96R30 315 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 TAS2R3Q9NYW6 316 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 PCDHB10Q9UN67 800 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 RAXQ9Y2V3 346 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 NBEAQ8NFP9 2946 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 IGHV3-43A0A0B4J1X8 118 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 TMEM30CPA0ZSE6 113 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 IGHV3-43DP0DP04 118 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 OMGP23515 440 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 MDH2P40926 338 aaKnown RBP11.54□□□□□ -0.56
CLK3-203ENST00000454830 OR10V1Q8NGI7 309 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 DECR2Q9NUI1 292 aa11.54□□□□□ -0.56
CLK3-203ENST00000454830 PROB1E7EW31 1015 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 PTBP3O95758 552 aaKnown RBP11.53□□□□□ -0.56
CLK3-203ENST00000454830 MBPP02686 304 aaPredicted RBP11.53□□□□□ -0.56
CLK3-203ENST00000454830 ASCL1P50553 236 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 EDDM3BP56851 147 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 COL10A1Q03692 680 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 BAP18Q8IXM2 172 aa11.53□□□□□ -0.56
CLK3-203ENST00000454830 FAM185AQ8N0U4 392 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms