RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 PMS2CLQ68D20 193 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 OR10J5Q8NHC4 309 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 MISP3Q96FF7 219 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 CABLES2Q9BTV7 478 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 CHST5Q9GZS9 411 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 ARFGEF3Q5TH69 2177 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 COL4A2P08572 1712 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 WIPF3A6NGB9 483 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 ISG15P05161 165 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 FSTP19883 344 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 DVL1P1P54792 670 aaPredicted RBP9.67□□□□□ -0.86
DDR1-240ENST00000454612 HABP2Q14520 560 aaPredicted RBP9.67□□□□□ -0.86
DDR1-240ENST00000454612 VAMP3Q15836 100 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 SNIP1Q8TAD8 396 aaKnown RBP9.67□□□□□ -0.86
DDR1-240ENST00000454612 AP1S3Q96PC3 154 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 SIGLEC12Q96PQ1 595 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 MRPL13Q9BYD1 178 aaKnown RBP9.67□□□□□ -0.86
DDR1-240ENST00000454612 GPR35Q9HC97 309 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 CBLN4Q9NTU7 201 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 METTL1Q9UBP6 276 aaKnown RBP9.67□□□□□ -0.86
DDR1-240ENST00000454612 DOPEY2Q9Y3R5 2298 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 CST2P09228 141 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 SFTPCP11686 197 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 RPL23AP62750 156 aaKnown RBP9.67□□□□□ -0.86
DDR1-240ENST00000454612 SSBP1Q04837 148 aaKnown RBP9.67□□□□□ -0.86
DDR1-240ENST00000454612 GTF3C1Q12789 2109 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 ZNF154Q13106 437 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 RAB35Q15286 201 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 WDR5BQ86VZ2 330 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 SLC35G3Q8N808 338 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 OR2H1Q9GZK4 316 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 ALX4Q9H161 411 aaPredicted RBP9.67□□□□□ -0.86
DDR1-240ENST00000454612 TMEM38BQ9NVV0 291 aa9.67□□□□□ -0.86
DDR1-240ENST00000454612 AURKAIP1Q9NWT8 199 aaPredicted RBP9.67□□□□□ -0.86
DDR1-240ENST00000454612 ZNF727A8MUV8 499 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 H2AFB1P0C5Y9 115 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 ADIRFQ15847 76 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 FDX2Q6P4F2 183 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 ZNF826PQ6ZT77 177 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 ZDHHC23Q8IYP9 409 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 MALSU1Q96EH3 234 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 PHYHIPLQ96FC7 376 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 RAB18Q9NP72 206 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 A0A1W2PPE3 182 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 CEBPZOSA8MTT3 80 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 TIMM8AO60220 97 aaPredicted RBP9.66□□□□□ -0.86
DDR1-240ENST00000454612 JTBO76095 146 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 TGFBR3Q03167 851 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 BTNL3Q6UXE8 466 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 TBC1D26Q86UD7 250 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 ZNF441Q8N8Z8 693 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 MSL2Q9HCI7 577 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 DEPPQ9NTK1 212 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 PRSS50Q9UI38 385 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 PINLYPA6NC86 204 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 OR6C6A6NF89 314 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 PDCD6O75340 191 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 CD46P15529 392 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 FUT6P51993 359 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 GTF3AQ92664 365 aaKnown RBP9.66□□□□□ -0.86
DDR1-240ENST00000454612 TMEM230Q96A57 120 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 RTBDNQ9BSG5 229 aaPredicted RBP9.66□□□□□ -0.86
DDR1-240ENST00000454612 SLC26A1Q9H2B4 701 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 KCNIP1Q9NZI2 227 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 GNG12Q9UBI6 72 aa9.66□□□□□ -0.86
DDR1-240ENST00000454612 NCOR2Q9Y618 2525 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 OPN1MWP04001 364 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 SNRPCP09234 159 aaKnown RBP9.65□□□□□ -0.86
DDR1-240ENST00000454612 OPN1MW2P0DN77 364 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 OPN1MW3P0DN78 364 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 SCAND1P57086 179 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 PMS2P11Q13670 270 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 PNLIPRP3Q17RR3 467 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 LHFPL2Q6ZUX7 228 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 OR4C5Q8NGB2 326 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 MARS2Q96GW9 593 aaKnown RBP9.65□□□□□ -0.86
DDR1-240ENST00000454612 RNF126Q9BV68 326 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 NAA60Q9H7X0 242 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 PILRBQ9UKJ0 227 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 ZDHHC8Q9ULC8 765 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 SIAH2O43255 324 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 CHST1O43916 411 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 MBPP02686 304 aaPredicted RBP9.65□□□□□ -0.86
DDR1-240ENST00000454612 FCGR3AP08637 254 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 IFI6P09912 130 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 ADCYAP1P18509 176 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 SRD5A2P31213 254 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 MRPL49Q13405 166 aaKnown RBP9.65□□□□□ -0.86
DDR1-240ENST00000454612 ABHD14AQ9BUJ0 271 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 BARX1Q9HBU1 254 aaPredicted RBP9.65□□□□□ -0.86
DDR1-240ENST00000454612 GPR27Q9NS67 375 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 HSF4Q9ULV5 492 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 IGF2RP11717 2491 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 PPP5D1E7EU14 171 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 F8VVB4 439 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 F8VWA3 439 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 MFNGO00587 321 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 PPYP01298 95 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 LSM6P62312 80 aaKnown RBP9.65□□□□□ -0.86
DDR1-240ENST00000454612 H3F3AP84243 136 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms