RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ZNF565Q8N9K5 539 aa11.47□□□□□ -0.57
HDAC4-205ENST00000454542 MRGPRDQ8TDS7 321 aa11.47□□□□□ -0.57
HDAC4-205ENST00000454542 DYRK2Q92630 601 aa11.47□□□□□ -0.57
HDAC4-205ENST00000454542 NICN1Q9BSH3 213 aa11.47□□□□□ -0.57
HDAC4-205ENST00000454542 PLGRKTQ9HBL7 147 aa11.47□□□□□ -0.57
HDAC4-205ENST00000454542 ETAA1Q9NY74 926 aa11.47□□□□□ -0.57
HDAC4-205ENST00000454542 IDI2-AS1Q9NZ38 188 aa11.47□□□□□ -0.57
HDAC4-205ENST00000454542 STEAP1Q9UHE8 339 aa11.47□□□□□ -0.57
HDAC4-205ENST00000454542 PEX16Q9Y5Y5 336 aa11.47□□□□□ -0.57
HDAC4-205ENST00000454542 A0A087WXM4 84 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 IFITM5A6NNB3 132 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 AIPO00170 330 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 ORC5O43913 435 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 GPR137BO60478 399 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 ARSBP15848 533 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 RAB3BP20337 219 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 RANBP1P43487 201 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 DYNLT3P51808 116 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 HLA-DRB5Q30154 266 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 BRICD5Q6PL45 260 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 OR51D1Q8NGF3 324 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 PIFOQ8TCI5 191 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 NEK7Q8TDX7 302 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 FAM3DQ96BQ1 224 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 MALSU1Q96EH3 234 aa11.46□□□□□ -0.57
HDAC4-205ENST00000454542 MBNL3Q9NUK0 354 aaKnown RBP11.46□□□□□ -0.57
HDAC4-205ENST00000454542 TRAV39A0A0B4J263 110 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 FAM181BA6NEQ2 426 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 F2RL2O00254 374 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 NDUFA7O95182 113 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 JUNBP17275 347 aaPredicted RBP11.45□□□□□ -0.58
HDAC4-205ENST00000454542 PAX6P26367 422 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 LGALS4P56470 323 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 CLDN12P56749 244 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 RELBQ01201 579 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 TMEM30BQ3MIR4 351 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 AWAT1Q58HT5 328 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 SLC16A12Q6ZSM3 486 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 ZNF554Q86TJ5 538 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 ABHD12Q8N2K0 398 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 TSPAN14Q8NG11 270 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 OR52M1Q8NGK5 317 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 ZNF596Q8TC21 504 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 MRPL30Q8TCC3 161 aaKnown RBP11.45□□□□□ -0.58
HDAC4-205ENST00000454542 SULT4A1Q9BR01 284 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 OR51E2Q9H255 320 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 C1RLQ9NZP8 487 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 TENM1Q9UKZ4 2725 aa11.45□□□□□ -0.58
HDAC4-205ENST00000454542 TMEM272A0A1B0GTI8 110 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 FAM172BPA6NC97 362 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 BTBD17A6NE02 478 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 C12orf77C9JDV5 145 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 LY6LH3BQJ8 138 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 H3BUX3 64 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 CD36P16671 472 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 GZMHP20718 246 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 GADD45AP24522 165 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 LOXL3P58215 753 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 FOXL1Q12952 345 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 PLA2G7Q13093 441 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 Q3ZCU0 254 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 C6orf183Q5T699 404 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 HES5Q5TA89 166 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 TRAT1Q6PIZ9 186 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 GDPGP1Q6ZNW5 385 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 Q6ZPA2 131 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 OR9G1Q8NH87 305 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 GCDHQ92947 438 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-205ENST00000454542 SSX3Q99909 188 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 URM1Q9BTM9 101 aaKnown RBP11.44□□□□□ -0.58
HDAC4-205ENST00000454542 MMP28Q9H239 520 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 TNFRSF19Q9NS68 423 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 HSF4Q9ULV5 492 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 SSR3Q9UNL2 185 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 MMP24Q9Y5R2 645 aa11.44□□□□□ -0.58
HDAC4-205ENST00000454542 TRBV6-6A0A0A6YYG2 114 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 NOTOA8MTQ0 251 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 NAPSAO96009 420 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 SMIM18P0DKX4 95 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 RAB6AP20340 208 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 HTR1DP28221 377 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 DYNC1I2Q13409 638 aaKnown RBP11.43□□□□□ -0.58
HDAC4-205ENST00000454542 C2orf76Q3KRA6 126 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 NKAPLQ5M9Q1 402 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 ZNF880Q6PDB4 577 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 LIAT1Q6ZQX7 453 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 C6orf201Q7Z4U5 140 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 TPRA1Q86W33 373 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 C8orf31Q8N9H6 132 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 OR4K15Q8NH41 348 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 YIPF6Q96EC8 236 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 KCTD7Q96MP8 289 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 NEDD4LQ96PU5 975 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 LIN7BQ9HAP6 207 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 GFOD1Q9NXC2 390 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 DPM3Q9P2X0 92 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 TCF19Q9Y242 345 aa11.43□□□□□ -0.58
HDAC4-205ENST00000454542 UBE2QL1A1L167 161 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 BUB1B-PAK6H3BSN5 160 aa11.42□□□□□ -0.58
HDAC4-205ENST00000454542 J3QR06 171 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms