RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ABCG5Q9H222 651 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ISG20L2Q9H9L3 353 aaKnown RBP4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 RETNQ9HD89 108 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TAS2R4Q9NYW5 299 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KIAA1456Q9P272 454 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 WARS2Q9UGM6 360 aaKnown RBP4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 POMPQ9Y244 141 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SMAD5-AS1Q9Y6J3 95 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 A3GALT2U3KPV4 340 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 VPS13DQ5THJ4 4388 aa4.65□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FUOMA2VDF0 154 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 G3V2T6 193 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 C15orf65H3BRN8 121 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SLC16A6O15403 523 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SULT1B1O43704 296 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SULT1C4O75897 302 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR7C1O76099 320 aaPredicted RBP4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZFPL1O95159 310 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IGHG4P01861 327 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 HTR1AP08908 422 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR2T7P0C7T2 308 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SERPINA2P20848 420 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CALRP27797 417 aaKnown RBP4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PSMB8P28062 276 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 BLVRBP30043 206 aaPredicted RBP4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SOX6P35712 828 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RAB7AP51149 207 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ACTR3P61158 418 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MMDQ15546 238 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ATP6AP1Q15904 470 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PNLIPRP3Q17RR3 467 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 KLHL22Q53GT1 634 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF691Q5VV52 312 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 XAF1Q6GPH4 301 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TGIF2LXQ8IUE1 241 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR8H3Q8N146 312 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FAM71E2Q8N5Q1 922 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SUMF2Q8NBJ7 301 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CHST4Q8NCG5 386 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CCDC197Q8NCU1 140 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR13C5Q8NGS8 318 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 HAVCR2Q8TDQ0 301 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 NEK7Q8TDX7 302 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RTN4IP1Q8WWV3 396 aaPredicted RBP4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 DNAJC9Q8WXX5 260 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 DCUN1D4Q92564 292 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RITA1Q96K30 269 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 S1PR3Q99500 378 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 DPCDQ9BVM2 203 aaPredicted RBP4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MRPL20Q9BYC9 149 aaKnown RBP4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GABARAPL1Q9H0R8 117 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZCCHC4Q9H5U6 513 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PCDHB16Q9NRJ7 776 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PLSCR3Q9NRY6 295 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZFP57Q9NU63 452 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LIN7CQ9NUP9 197 aaKnown RBP4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF107Q9UII5 783 aaPredicted RBP4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OAZ3Q9UMX2 235 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FBXO7Q9Y3I1 522 aa4.65□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IGHV4OR15-8A0A075B7B6 117 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 A0A087WW49 117 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 DAPL1A0PJW8 107 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TMEM30CPA0ZSE6 113 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 C12orf77C9JDV5 145 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 NPIPB11E5RHQ5 1161 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GEMIN2O14893 280 aaKnown RBP4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GYG2O15488 501 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SOX15O60248 233 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 HTR3BO95264 441 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FAM107AO95990 144 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MOSP00540 346 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IGHV3-11P01762 117 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CHATP28329 748 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SLC6A1P30531 599 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RBM11P57052 281 aaKnown RBP4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF616Q08AN1 781 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF816Q0VGE8 651 aaPredicted RBP4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 KIAA0141Q14154 515 aaPredicted RBP4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 KIR2DS1Q14954 304 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RSU1Q15404 277 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TMEM244Q5VVB8 128 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 THNSL2Q86YJ6 484 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 COMMD1Q8N668 190 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RNF152Q8N8N0 203 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR2T10Q8NGZ9 312 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR1L1Q8NH94 360 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MYOZ3Q8TDC0 251 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 DLX4Q92988 240 aaPredicted RBP4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ARL11Q969Q4 196 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 C10orf35Q96D05 121 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GPER1Q99527 375 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RASL11BQ9BPW5 248 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FAM110AQ9BQ89 295 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ALG8Q9BVK2 526 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GABARAPL3Q9BY60 117 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SEBOXQ9HB31 216 aaPredicted RBP4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 AMBNQ9NP70 447 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IMPAD1Q9NX62 359 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GFOD1Q9NXC2 390 aa4.64□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GNG12Q9UBI6 72 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms