RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 SNTNA6NMZ2 147 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 SDCBPO00560 298 aaPredicted RBP9.17□□□□□ -0.94
GARNL3-210ENST00000453030 MAGEB3O15480 346 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 CDRT1O95170 752 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 GAPDHP04406 335 aaKnown RBP9.17□□□□□ -0.94
GARNL3-210ENST00000453030 IGHV3-43DP0DP04 118 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 KCNJ3P48549 501 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 PAX5Q02548 391 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 GPR50Q13585 617 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 CXorf66Q5JRM2 361 aaPredicted RBP9.17□□□□□ -0.94
GARNL3-210ENST00000453030 SLC25A30Q5SVS4 291 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 TGIF2LXQ8IUE1 241 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 IZUMO1Q8IYV9 350 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 SYS1Q8N2H4 156 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 Q8N9W7 124 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 OR10A7Q8NGE5 316 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 OR5M8Q8NGP6 311 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 OR8U1Q8NH10 309 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 ABCG5Q9H222 651 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 NCOR1P1Q9H4R4 102 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 DCLRE1BQ9H816 532 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 AMBNQ9NP70 447 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 ZMAT5Q9UDW3 170 aaKnown RBP9.17□□□□□ -0.94
GARNL3-210ENST00000453030 ST3GAL6Q9Y274 331 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 U3KQK5 164 aa9.17□□□□□ -0.94
GARNL3-210ENST00000453030 TMEM30CPA0ZSE6 113 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 SEC14L6B5MCN3 397 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 RAMP3O60896 148 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 RPSAP08865 295 aaKnown RBP9.16□□□□□ -0.94
GARNL3-210ENST00000453030 SERPINA2P20848 420 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 ECI1P42126 302 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 RBM11P57052 281 aaKnown RBP9.16□□□□□ -0.94
GARNL3-210ENST00000453030 PNLIPRP3Q17RR3 467 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 C9orf66Q5T8R8 295 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 Q8N6K4 173 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 OR2T10Q8NGZ9 312 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 NEK7Q8TDX7 302 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 CCDC107Q8WV48 283 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 RGP1Q92546 391 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-210ENST00000453030 ARL11Q969Q4 196 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 ASCL2Q99929 193 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 HSPB9Q9BQS6 159 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 JAM3Q9BX67 310 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 LIN7CQ9NUP9 197 aaKnown RBP9.16□□□□□ -0.94
GARNL3-210ENST00000453030 ERVK13-1Q9NX77 482 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 GMPPBQ9Y5P6 360 aa9.16□□□□□ -0.94
GARNL3-210ENST00000453030 ZNF736B4DX44 427 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-210ENST00000453030 GEMIN2O14893 280 aaKnown RBP9.15□□□□□ -0.94
GARNL3-210ENST00000453030 SLC31A2O15432 143 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 MPZL2O60487 215 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 FADS2O95864 444 aaKnown RBP9.15□□□□□ -0.94
GARNL3-210ENST00000453030 NHLRC4P0CG21 123 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-210ENST00000453030 IL3RAP26951 378 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 ALDH3A2P51648 485 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 GTF2A1P52655 376 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-210ENST00000453030 GBX2P52951 348 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-210ENST00000453030 GP2P55259 537 aaKnown RBP9.15□□□□□ -0.94
GARNL3-210ENST00000453030 FOXE3Q13461 319 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 EBI3Q14213 229 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 NKAPLQ5M9Q1 402 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 ATAD3CQ5T2N8 411 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 DDI2Q5TDH0 399 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 ZNF529Q6P280 563 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 SLC16A12Q6ZSM3 486 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 OR52N1Q8NH53 320 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 RTN4IP1Q8WWV3 396 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-210ENST00000453030 MYCBPQ99417 103 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-210ENST00000453030 RASL11BQ9BPW5 248 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 GON7Q9BXV9 100 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 GFOD1Q9NXC2 390 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 ING4Q9UNL4 249 aa9.15□□□□□ -0.94
GARNL3-210ENST00000453030 LSM4Q9Y4Z0 139 aaKnown RBP9.15□□□□□ -0.94
GARNL3-210ENST00000453030 A0A1W2PP11 408 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 C15orf65H3BRN8 121 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 MOSP00540 346 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 CSTBP04080 98 aaKnown RBP9.14□□□□□ -0.95
GARNL3-210ENST00000453030 CD2P06729 351 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 SLC2A2P11168 524 aaPredicted RBP9.14□□□□□ -0.95
GARNL3-210ENST00000453030 GABRB1P18505 474 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 VDAC1P21796 283 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 MYF6P23409 242 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 PPP3R1P63098 170 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 MRPL28Q13084 256 aaKnown RBP9.14□□□□□ -0.95
GARNL3-210ENST00000453030 XAF1Q6GPH4 301 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 PRR18Q8N4B5 295 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 CBR4Q8N4T8 237 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 TMEM104Q8NE00 496 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 Q8NFD4 153 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 OR52I1Q8NGK6 324 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 GPR148Q8TDV2 347 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 C4orf3Q8WVX3 66 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 TMEM106AQ96A25 262 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 ORAI1Q96D31 301 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 S1PR3Q99500 378 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 S100A13Q99584 98 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 METTL9Q9H1A3 318 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 SACSQ9NZJ4 4579 aa9.14□□□□□ -0.95
GARNL3-210ENST00000453030 AIPO00170 330 aa9.13□□□□□ -0.95
GARNL3-210ENST00000453030 LY86O95711 162 aa9.13□□□□□ -0.95
GARNL3-210ENST00000453030 ELANEP08246 267 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms