RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 RNF157Q96PX1 679 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 TMEM70Q9BUB7 260 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 CLEC7AQ9BXN2 247 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 SLC29A3Q9BZD2 475 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 TMEM126AQ9H061 195 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF71Q9NQZ8 489 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 RBFOX1Q9NWB1 397 aaKnown RBP3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 CLCF1Q9UBD9 225 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 HEBP2Q9Y5Z4 205 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 BICRAQ9NZM4 1560 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 DHX57Q6P158 1386 aaKnown RBP3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 VIRMAQ69YN4 1812 aaKnown RBP3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 A0A087WW49 117 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 A0A087WWV3 80 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 IGHV1-69DA0A0B4J2H0 117 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 A0A0J9YXV3 536 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 PLAC8L1A1L4L8 177 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 NDUFC2O95298 119 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 CRYBA1P05813 215 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 FGF6P10767 208 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 LAMP1P11279 417 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 CTLA4P16410 223 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF25P17030 456 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 SPI1P17947 270 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 RAB3AP20336 220 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 CDK2P24941 298 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 APLNRP35414 380 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 TALDO1P37837 337 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 MDH2P40926 338 aaKnown RBP3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 CD200P41217 278 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 NCALDP61601 193 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 PAX8Q06710 450 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 PNOCQ13519 176 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 KIAA0087Q14695 138 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 SIX1Q15475 284 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 ATP6AP1LQ52LC2 224 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 MESTQ5EB52 335 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF506Q5JVG8 444 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 MORN5Q5VZ52 161 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 KDM4DQ6B0I6 523 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 REG3GQ6UW15 175 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 DEFB125Q8N687 156 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR4S2Q8NH73 311 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF675Q8TD23 568 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 RXFP4Q8TDU9 374 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 TAF15Q92804 592 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 GHSRQ92847 366 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 GALMQ96C23 342 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 REEP6Q96HR9 211 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 SLC35E1Q96K37 410 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF778Q96MU6 729 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 CCDC115Q96NT0 180 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF184Q99676 751 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 PRSS27Q9BQR3 290 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 SFXN3Q9BWM7 321 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZDHHC11Q9H8X9 412 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 NOX3Q9HBY0 568 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 PRTFDC1Q9NRG1 225 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 UBQLN4Q9NRR5 601 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 HSPB8Q9UJY1 196 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 WASHC3Q9Y3C0 194 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 ENPP4Q9Y6X5 453 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 MIA2Q96PC5 1412 aa3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 RIMS1Q86UR5 1692 aaKnown RBP3.43□□□□□ -1.86
HMGB3P21-201ENST00000452483 MYH3P11055 1940 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 WDR81Q562E7 1941 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 KIAA1210Q9ULL0 1709 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 KIF15Q9NS87 1388 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 TRAV8-3A0A0A6YYJ7 113 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 BORCS7-ASMTA0A0B4J1R7 106 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 MYBPHLA2RUH7 354 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 TMEM189A5PLL7 270 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 NTN3O00634 580 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 PSPHP1O15172 72 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF207O43670 478 aaKnown RBP3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 TBL1XO60907 577 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 CA2P00918 260 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 TRBV12-3P01733 135 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 C1QBP02746 253 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 SERPINE1P05121 402 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 DBIP07108 87 aaKnown RBP3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 UBBP0CG47 229 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 PRTN3P24158 256 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 GADD45AP24522 165 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 SLC25A1P53007 311 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 GFERP55789 205 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 CTBP2P56545 445 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 TAS2R19P59542 299 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 DEFA1P59665 94 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 GNG2P59768 71 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 RPS24P62847 133 aaKnown RBP3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 BAMBIQ13145 260 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 HNRNPA0Q13151 305 aaKnown RBP3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 IL15RAQ13261 267 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 KLF9Q13886 244 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 RGNQ15493 299 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 TGIF1Q15583 401 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 Q499Y3 187 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 C6orf99Q4VX62 202 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 C1orf194Q5T5A4 169 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms