RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SAMD5Q5TGI4 173 aa10.28□□□□□ -0.76
CHD3-206ENST00000452447 THNSL2Q86YJ6 484 aa10.28□□□□□ -0.76
CHD3-206ENST00000452447 STX19Q8N4C7 294 aa10.28□□□□□ -0.76
CHD3-206ENST00000452447 OR56B4Q8NH76 319 aa10.28□□□□□ -0.76
CHD3-206ENST00000452447 NRG4Q8WWG1 115 aa10.28□□□□□ -0.76
CHD3-206ENST00000452447 PGLYRP3Q96LB9 341 aa10.28□□□□□ -0.76
CHD3-206ENST00000452447 OR14A2Q96R54 314 aa10.28□□□□□ -0.76
CHD3-206ENST00000452447 CNOT2Q9NZN8 540 aaKnown RBP10.28□□□□□ -0.76
CHD3-206ENST00000452447 ZNF581Q9P0T4 197 aa10.28□□□□□ -0.76
CHD3-206ENST00000452447 TRAV8-7A0A075B6U6 113 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 A0A1W2PP11 408 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 TCRBV4S1A1TA0A5B7 111 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 MAGEA13PA6NCF6 341 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 SH2D7A6NKC9 451 aaPredicted RBP10.27□□□□□ -0.76
CHD3-206ENST00000452447 ADARB2-AS1A8MUL3 147 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 SNRNP70P08621 437 aaKnown RBP10.27□□□□□ -0.76
CHD3-206ENST00000452447 PF4V1P10720 104 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 FSTP19883 344 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 RPS11P62280 158 aaKnown RBP eCLIP10.27□□□□□ -0.76
CHD3-206ENST00000452447 CD83Q01151 205 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 FBLN7Q53RD9 439 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 AHSA2Q719I0 299 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 OR8H3Q8N146 312 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 DRAM1Q8N682 238 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 ZNF485Q8NCK3 441 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 BPIFB6Q8NFQ5 453 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 OR4X2Q8NGF9 303 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 CCDC107Q8WV48 283 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 ARL11Q969Q4 196 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 MRPS24Q96EL2 167 aaKnown RBP10.27□□□□□ -0.76
CHD3-206ENST00000452447 SPACA1Q9HBV2 294 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 MOB4Q9Y3A3 225 aa10.27□□□□□ -0.76
CHD3-206ENST00000452447 FAM90A18PA6NE21 464 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 FAM90A16PA6NEW6 464 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 FAM90A20PA6NIJ5 464 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 FAM90A9PA6NNJ1 464 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 FAM90A12PA8MX19 464 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 FAM90A5PA8MXJ8 464 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 MCRIP1C9JLW8 97 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 AIPO00170 330 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 MAS1P04201 325 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 AMY1AP04745 511 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 AMY2AP04746 511 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 GNAO1P09471 354 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 FAM90A15PP0C7V4 464 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 FAM90A13PP0C7W8 464 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 FAM90A14PP0C7W9 464 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 FAM90A24PP0C7X0 464 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 TMEM11P17152 192 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 CELP19835 753 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 AQP4P55087 323 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 WNT4P56705 351 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 KHDC1LQ5JSQ8 128 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 AWAT2Q6E213 333 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 GLIPR1L1Q6UWM5 242 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 MUL1Q969V5 352 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 PSORS1C1Q9UIG5 152 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 ERGIC3Q9Y282 383 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 MRPS28Q9Y2Q9 187 aaKnown RBP10.26□□□□□ -0.77
CHD3-206ENST00000452447 TSSC4Q9Y5U2 329 aaPredicted RBP10.26□□□□□ -0.77
CHD3-206ENST00000452447 A0A1W2PPE3 182 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 A0A1W2PPI3 338 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 SDCBPO00560 298 aaPredicted RBP10.26□□□□□ -0.77
CHD3-206ENST00000452447 ORC5O43913 435 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 CD33P20138 364 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 DOC2BQ14184 412 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 DIAPH2-AS1Q14236 149 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 OXLD1Q5BKU9 147 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 KPRPQ5T749 579 aaPredicted RBP10.26□□□□□ -0.77
CHD3-206ENST00000452447 CDH26Q8IXH8 852 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 OR52M1Q8NGK5 317 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 THRSPQ92748 146 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 RAB9BQ9NP90 201 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 PLCXD1Q9NUJ7 323 aa10.26□□□□□ -0.77
CHD3-206ENST00000452447 TRBV5-7A0A0A0MS05 114 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 C15orf65H3BRN8 121 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 CCRL2O00421 344 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 HSD17B6O14756 317 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 IGKV1D-33P01593 117 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 IGKV1-33P01594 117 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 PF4P02776 101 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 MT-ND4P03905 459 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 GAPDHP04406 335 aaKnown RBP10.25□□□□□ -0.77
CHD3-206ENST00000452447 IL3RAP26951 378 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 MAPK3P27361 379 aaPredicted RBP10.25□□□□□ -0.77
CHD3-206ENST00000452447 HNF4GQ14541 408 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 RAB12Q6IQ22 244 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 ZNF497Q6ZNH5 498 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 REC114Q7Z4M0 266 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 MOB3BQ86TA1 216 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 UBALD1Q8TB05 177 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 SGCDQ92629 289 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 MYDGFQ969H8 173 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 DERL3Q96Q80 235 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 ETAA1Q9NY74 926 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 TRAPPC2LQ9UL33 140 aa10.25□□□□□ -0.77
CHD3-206ENST00000452447 PSMB11A5LHX3 300 aa10.24□□□□□ -0.77
CHD3-206ENST00000452447 SPINT2O43291 252 aa10.24□□□□□ -0.77
CHD3-206ENST00000452447 PRB2P02812 416 aaPredicted RBP10.24□□□□□ -0.77
CHD3-206ENST00000452447 CD1AP06126 327 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms