RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 CCDC107Q8WV48 283 aa13.03□□□□□ -0.32
RPUSD3-209ENST00000451405 CYYR1Q96J86 154 aa13.03□□□□□ -0.32
RPUSD3-209ENST00000451405 PGLYRP3Q96LB9 341 aa13.03□□□□□ -0.32
RPUSD3-209ENST00000451405 WWC2-AS2Q96NR7 200 aa13.03□□□□□ -0.32
RPUSD3-209ENST00000451405 ZNF184Q99676 751 aaPredicted RBP13.03□□□□□ -0.32
RPUSD3-209ENST00000451405 AMMECR1Q9Y4X0 333 aaPredicted RBP13.03□□□□□ -0.32
RPUSD3-209ENST00000451405 IRGMA1A4Y4 181 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 C15orf65H3BRN8 121 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 MYL12AP19105 171 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 GZMHP20718 246 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 ST3GAL4Q11206 333 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 MADCAM1Q13477 382 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 RIPK1Q13546 671 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 SLC22A6Q4U2R8 563 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 ATAD3CQ5T2N8 411 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 FOXB2Q5VYV0 432 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 SLC16A12Q6ZSM3 486 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 DHRSXQ8N5I4 330 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 S100A13Q99584 98 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 MOB4Q9Y3A3 225 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 TSSC4Q9Y5U2 329 aaPredicted RBP13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 HSPE1-MOB4S4R3N1 261 aa13.02□□□□□ -0.33
RPUSD3-209ENST00000451405 TRBV5-7A0A0A0MS05 114 aa13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 TMEM30CPA0ZSE6 113 aa13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 M0QZK8 103 aa13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 MT-ND4P03905 459 aa13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 GNAO1P09471 354 aa13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 CD33P20138 364 aa13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 HES1Q14469 280 aa13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 Q499Y3 187 aa13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 ZNF329Q86UD4 541 aa13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 ARL11Q969Q4 196 aa13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 RBMXL1Q96E39 390 aaKnown RBP13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 NOL4LQ96MY1 436 aaPredicted RBP13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 PCDHB16Q9NRJ7 776 aa13.01□□□□□ -0.33
RPUSD3-209ENST00000451405 IGHV3-43A0A0B4J1X8 118 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 PNMA8CA0A1B0GUJ8 204 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 IGKV1D-33P01593 117 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 IGKV1-33P01594 117 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 IGHV3-43DP0DP04 118 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 PF4V1P10720 104 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 GTF2F2P13984 249 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 TMEM11P17152 192 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 REG1BP48304 166 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 RAB7AP51149 207 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 MPV17LQ2QL34 196 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 YIF1BQ5BJH7 314 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 ZNF497Q6ZNH5 498 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 OR8H3Q8N146 312 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 PACRGLQ8N7B6 248 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 C5orf56Q8N8D9 126 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 SETD9Q8NE22 299 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 OR10X1Q8NGY0 326 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 MUL1Q969V5 352 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 OR14A2Q96R54 314 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 PAK1IP1Q9NWT1 392 aaPredicted RBP13□□□□□ -0.33
RPUSD3-209ENST00000451405 CHCHD3Q9NX63 227 aaKnown RBP13□□□□□ -0.33
RPUSD3-209ENST00000451405 LINC00527Q9UJ94 153 aa13□□□□□ -0.33
RPUSD3-209ENST00000451405 IGHV3-72A0A0B4J1Y9 119 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 LINC01548A6NM66 108 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 ZNF780AO75290 641 aaPredicted RBP12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 MAS1P04201 325 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 VHLP40337 213 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 ZNF816Q0VGE8 651 aaPredicted RBP12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 EBI3Q14213 229 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 GLIPR1L1Q6UWM5 242 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 MOB3BQ86TA1 216 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 LINC00596Q86U02 117 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 LYPD6Q86Y78 171 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 OR4X2Q8NGF9 303 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 OR52M1Q8NGK5 317 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 NEK7Q8TDX7 302 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 GFOD1Q9NXC2 390 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 PSORS1C1Q9UIG5 152 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 MRPS28Q9Y2Q9 187 aaKnown RBP12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 COL7A1Q02388 2944 aa12.99□□□□□ -0.33
RPUSD3-209ENST00000451405 IGHV1-3A0A0C4DH29 117 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 PSMB11A5LHX3 300 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 CCRL2O00421 344 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 SDCBPO00560 298 aaPredicted RBP12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 HSD17B6O14756 317 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 SLC31A2O15432 143 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 ORC5O43913 435 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 GAPDHP04406 335 aaKnown RBP12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 FSTP19883 344 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 CD69Q07108 199 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 RCN1Q15293 331 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 KHDC1LQ5JSQ8 128 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 C5orf24Q7Z6I8 188 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 JAGN1Q8N5M9 183 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 LINC00311Q8N616 119 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 ST6GALNAC6Q969X2 333 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 EAF1Q96JC9 268 aaPredicted RBP12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 BANF2Q9H503 90 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 RCC2Q9P258 522 aaKnown RBP12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 CKLFQ9UBR5 152 aa12.98□□□□□ -0.33
RPUSD3-209ENST00000451405 ZNF736B4DX44 427 aaPredicted RBP12.97□□□□□ -0.33
RPUSD3-209ENST00000451405 C12orf77C9JDV5 145 aa12.97□□□□□ -0.33
RPUSD3-209ENST00000451405 AIPO00170 330 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms