RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 FBLIM1Q8WUP2 373 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 R3HDM4Q96D70 268 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 MRPS24Q96EL2 167 aaKnown RBP12.21□□□□□ -0.45
CHD3-205ENST00000449744 OR4F4Q96R69 305 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 OCSTAMPQ9BR26 566 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 SPACA1Q9HBV2 294 aa12.21□□□□□ -0.45
CHD3-205ENST00000449744 MCRIP1C9JLW8 97 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 AIPO00170 330 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 RAB7AP51149 207 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 C9orf152Q5JTZ5 239 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 THNSL2Q86YJ6 484 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 NKAIN3Q8N8D7 197 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 OR5AU1Q8NGC0 362 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 OR56B4Q8NH76 319 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 WIPF2Q8TF74 440 aaPredicted RBP12.2□□□□□ -0.46
CHD3-205ENST00000449744 CCDC107Q8WV48 283 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 TFAP2CQ92754 450 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 ARL11Q969Q4 196 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 DERL3Q96Q80 235 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 DCLRE1BQ9H816 532 aa12.2□□□□□ -0.46
CHD3-205ENST00000449744 SDCBPO00560 298 aaPredicted RBP12.19□□□□□ -0.46
CHD3-205ENST00000449744 SNRNP70P08621 437 aaKnown RBP12.19□□□□□ -0.46
CHD3-205ENST00000449744 HES1Q14469 280 aa12.19□□□□□ -0.46
CHD3-205ENST00000449744 OR8H3Q8N146 312 aa12.19□□□□□ -0.46
CHD3-205ENST00000449744 MYDGFQ969H8 173 aa12.19□□□□□ -0.46
CHD3-205ENST00000449744 MND1Q9BWT6 205 aa12.19□□□□□ -0.46
CHD3-205ENST00000449744 RAB9BQ9NP90 201 aa12.19□□□□□ -0.46
CHD3-205ENST00000449744 FKBP14Q9NWM8 211 aa12.19□□□□□ -0.46
CHD3-205ENST00000449744 SCN3BQ9NY72 215 aa12.19□□□□□ -0.46
CHD3-205ENST00000449744 ETAA1Q9NY74 926 aa12.19□□□□□ -0.46
CHD3-205ENST00000449744 TRAPPC2LQ9UL33 140 aa12.19□□□□□ -0.46
CHD3-205ENST00000449744 MOB4Q9Y3A3 225 aa12.19□□□□□ -0.46
CHD3-205ENST00000449744 TGP01266 2768 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 A0A1W2PPE3 182 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A18PA6NE21 464 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A16PA6NEW6 464 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A20PA6NIJ5 464 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 SH2D7A6NKC9 451 aaPredicted RBP12.18□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A9PA6NNJ1 464 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A12PA8MX19 464 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A5PA8MXJ8 464 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 PTGES3LE9PB15 166 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 PIN1P1O15428 100 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 ORC5O43913 435 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 CRTAPO75718 401 aaPredicted RBP12.18□□□□□ -0.46
CHD3-205ENST00000449744 MT-ND4P03905 459 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 CDK1P06493 297 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A15PP0C7V4 464 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A13PP0C7W8 464 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A14PP0C7W9 464 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A24PP0C7X0 464 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 TMEM11P17152 192 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 FBLN7Q53RD9 439 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 ZNF497Q6ZNH5 498 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 DRAM1Q8N682 238 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 OR52M1Q8NGK5 317 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 UBALD1Q8TB05 177 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 SELENOIQ9C0D9 397 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 BANF2Q9H503 90 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 PEX16Q9Y5Y5 336 aa12.18□□□□□ -0.46
CHD3-205ENST00000449744 A0A1W2PPI3 338 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 A0A1W2PRX2 142 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 G3V4G9 280 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 C15orf65H3BRN8 121 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 CCRL2O00421 344 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 HSD17B6O14756 317 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 GAPDHP04406 335 aaKnown RBP12.17□□□□□ -0.46
CHD3-205ENST00000449744 MGMTP16455 207 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 IL3RAP26951 378 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 DIAPH2-AS1Q14236 149 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 C6orf141Q5SZD1 244 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 C6orf183Q5T699 404 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 SYT6Q5T7P8 510 aaPredicted RBP12.17□□□□□ -0.46
CHD3-205ENST00000449744 RAB12Q6IQ22 244 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 MS4A15Q8N5U1 240 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 OR4X2Q8NGF9 303 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 UQCC2Q9BRT2 126 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 GFOD1Q9NXC2 390 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 RCC2Q9P258 522 aaKnown RBP12.17□□□□□ -0.46
CHD3-205ENST00000449744 GHRLQ9UBU3 117 aa12.17□□□□□ -0.46
CHD3-205ENST00000449744 IGHV3-43A0A0B4J1X8 118 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 TCRBV4S1A1TA0A5B7 111 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A10PA6NDY2 464 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A7PA6NKC0 464 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 ADARB2-AS1A8MUL3 147 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 FAM90A23PA8MXZ1 464 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 SPINT2O43291 252 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 IGKV1D-33P01593 117 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 IGKV1-33P01594 117 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 AMY1AP04745 511 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 AMY2AP04746 511 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 IGHV3-43DP0DP04 118 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 PF4V1P10720 104 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 CD83Q01151 205 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 GPR50Q13585 617 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 HNF4GQ14541 408 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 ACSM3Q53FZ2 586 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 RNLSQ5VYX0 342 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 MOB3BQ86TA1 216 aa12.16□□□□□ -0.46
CHD3-205ENST00000449744 OR4K15Q8NH41 348 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms