RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 GPR12P47775 334 aa12.21□□□□□ -0.45
TRA2A-203ENST00000448549 DCTN2Q13561 401 aaKnown RBP12.21□□□□□ -0.45
TRA2A-203ENST00000448549 PNLIPRP3Q17RR3 467 aa12.21□□□□□ -0.45
TRA2A-203ENST00000448549 KIAA2026Q5HYC2 2103 aa12.21□□□□□ -0.45
TRA2A-203ENST00000448549 FAM53AQ6NSI3 398 aaPredicted RBP12.21□□□□□ -0.45
TRA2A-203ENST00000448549 TGIF2LXQ8IUE1 241 aa12.21□□□□□ -0.45
TRA2A-203ENST00000448549 CBR4Q8N4T8 237 aa12.21□□□□□ -0.45
TRA2A-203ENST00000448549 Q8N6K4 173 aa12.21□□□□□ -0.45
TRA2A-203ENST00000448549 UBALD1Q8TB05 177 aa12.21□□□□□ -0.45
TRA2A-203ENST00000448549 JAM3Q9BX67 310 aa12.21□□□□□ -0.45
TRA2A-203ENST00000448549 ABCG5Q9H222 651 aa12.21□□□□□ -0.45
TRA2A-203ENST00000448549 DCLRE1BQ9H816 532 aa12.21□□□□□ -0.45
TRA2A-203ENST00000448549 FAM53CQ9NYF3 392 aa12.21□□□□□ -0.45
TRA2A-203ENST00000448549 ZMAT5Q9UDW3 170 aaKnown RBP12.21□□□□□ -0.45
TRA2A-203ENST00000448549 ING4Q9UNL4 249 aa12.21□□□□□ -0.45
TRA2A-203ENST00000448549 TENM3Q9P273 2699 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 DNAH9Q9NYC9 4486 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 TMEM30CPA0ZSE6 113 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 H3BNX3 289 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 C15orf65H3BRN8 121 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 SDCBPO00560 298 aaPredicted RBP12.2□□□□□ -0.46
TRA2A-203ENST00000448549 OR7C1O76099 320 aaPredicted RBP12.2□□□□□ -0.46
TRA2A-203ENST00000448549 LUMP51884 338 aaPredicted RBP12.2□□□□□ -0.46
TRA2A-203ENST00000448549 RAB40BQ12829 278 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 DEFB136Q30KP8 78 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 IZUMO1Q8IYV9 350 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 OR52I1Q8NGK6 324 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 OR2T10Q8NGZ9 312 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 OR52N1Q8NH53 320 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 RHOXF1Q8NHV9 184 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 CCDC107Q8WV48 283 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 ARL11Q969Q4 196 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 Q96MT0 163 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 IFT22Q9H7X7 185 aa12.2□□□□□ -0.46
TRA2A-203ENST00000448549 LIN7CQ9NUP9 197 aaKnown RBP12.2□□□□□ -0.46
TRA2A-203ENST00000448549 ZNF736B4DX44 427 aaPredicted RBP12.19□□□□□ -0.46
TRA2A-203ENST00000448549 GEMIN2O14893 280 aaKnown RBP12.19□□□□□ -0.46
TRA2A-203ENST00000448549 MPZL2O60487 215 aa12.19□□□□□ -0.46
TRA2A-203ENST00000448549 RAMP3O60896 148 aa12.19□□□□□ -0.46
TRA2A-203ENST00000448549 CSTBP04080 98 aaKnown RBP12.19□□□□□ -0.46
TRA2A-203ENST00000448549 RBM11P57052 281 aaKnown RBP12.19□□□□□ -0.46
TRA2A-203ENST00000448549 GPR50Q13585 617 aa12.19□□□□□ -0.46
TRA2A-203ENST00000448549 Q8N9W7 124 aa12.19□□□□□ -0.46
TRA2A-203ENST00000448549 OR52M1Q8NGK5 317 aa12.19□□□□□ -0.46
TRA2A-203ENST00000448549 GPR148Q8TDV2 347 aa12.19□□□□□ -0.46
TRA2A-203ENST00000448549 RBMXL1Q96E39 390 aaKnown RBP12.19□□□□□ -0.46
TRA2A-203ENST00000448549 GON7Q9BXV9 100 aa12.19□□□□□ -0.46
TRA2A-203ENST00000448549 METTL9Q9H1A3 318 aa12.19□□□□□ -0.46
TRA2A-203ENST00000448549 PLSCR3Q9NRY6 295 aa12.19□□□□□ -0.46
TRA2A-203ENST00000448549 IGHV3-43A0A0B4J1X8 118 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 CD2P06729 351 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 LIMS3P0CW19 117 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 LIMS4P0CW20 117 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 IGHV3-43DP0DP04 118 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 SERPINA2P20848 420 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 ZNF93P35789 620 aaPredicted RBP12.18□□□□□ -0.46
TRA2A-203ENST00000448549 GP2P55259 537 aaKnown RBP12.18□□□□□ -0.46
TRA2A-203ENST00000448549 KIR2DS1Q14954 304 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 CXorf66Q5JRM2 361 aaPredicted RBP12.18□□□□□ -0.46
TRA2A-203ENST00000448549 NHLRC3Q5JS37 347 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 ATAD3CQ5T2N8 411 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 XAF1Q6GPH4 301 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 LINC00311Q8N616 119 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 TMEM104Q8NE00 496 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 OR8U1Q8NH10 309 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 RTN4IP1Q8WWV3 396 aaPredicted RBP12.18□□□□□ -0.46
TRA2A-203ENST00000448549 ST6GALNAC6Q969X2 333 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 TMEM106AQ96A25 262 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 S1PR3Q99500 378 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 TMEM138Q9NPI0 162 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 GFOD1Q9NXC2 390 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 IL36GQ9NZH8 169 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 RYR3Q15413 4870 aa12.18□□□□□ -0.46
TRA2A-203ENST00000448549 DYNC1I1O14576 645 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 ORC5O43913 435 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 MOSP00540 346 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 MT-ND4P03905 459 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 NHLRC4P0CG21 123 aaPredicted RBP12.17□□□□□ -0.46
TRA2A-203ENST00000448549 CD1BP29016 333 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 CDX1P47902 265 aaPredicted RBP12.17□□□□□ -0.46
TRA2A-203ENST00000448549 PPP3R1P63098 170 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 FOXE3Q13461 319 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 DDI2Q5TDH0 399 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 RNF152Q8N8N0 203 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 C8orf31Q8N9H6 132 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 OR5M8Q8NGP6 311 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 NEK7Q8TDX7 302 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 ORAI1Q96D31 301 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 PRR25Q96S07 402 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 S100A13Q99584 98 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 RASL11BQ9BPW5 248 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 HSPB9Q9BQS6 159 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 MRPS18AQ9NVS2 196 aaKnown RBP12.17□□□□□ -0.46
TRA2A-203ENST00000448549 RPL36Q9Y3U8 105 aaKnown RBP12.17□□□□□ -0.46
TRA2A-203ENST00000448549 LSM4Q9Y4Z0 139 aaKnown RBP12.17□□□□□ -0.46
TRA2A-203ENST00000448549 U3KQK5 164 aa12.17□□□□□ -0.46
TRA2A-203ENST00000448549 LOC100130705A0A1B0GUX0 176 aa12.16□□□□□ -0.46
TRA2A-203ENST00000448549 A0A1W2PP11 408 aa12.16□□□□□ -0.46
TRA2A-203ENST00000448549 SLC31A2O15432 143 aa12.16□□□□□ -0.46
TRA2A-203ENST00000448549 ELANEP08246 267 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms