RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 FAM46BQ96A09 425 aa10.24□□□□□ -0.77
PRPF40A-203ENST00000448428 CREB3L1Q96BA8 519 aa10.24□□□□□ -0.77
PRPF40A-203ENST00000448428 CYYR1Q96J86 154 aa10.24□□□□□ -0.77
PRPF40A-203ENST00000448428 Q96M66 194 aa10.24□□□□□ -0.77
PRPF40A-203ENST00000448428 NPFFR1Q9GZQ6 430 aa10.24□□□□□ -0.77
PRPF40A-203ENST00000448428 RANBP3Q9H6Z4 567 aaPredicted RBP10.24□□□□□ -0.77
PRPF40A-203ENST00000448428 SPACA1Q9HBV2 294 aa10.24□□□□□ -0.77
PRPF40A-203ENST00000448428 GHRLQ9UBU3 117 aa10.24□□□□□ -0.77
PRPF40A-203ENST00000448428 PITPNC1Q9UKF7 332 aa10.24□□□□□ -0.77
PRPF40A-203ENST00000448428 PSG11Q9UQ72 335 aa10.24□□□□□ -0.77
PRPF40A-203ENST00000448428 PEX16Q9Y5Y5 336 aa10.24□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM90A10PA6NDY2 464 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM90A18PA6NE21 464 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM90A16PA6NEW6 464 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM90A20PA6NIJ5 464 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM90A7PA6NKC0 464 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM90A12PA8MX19 464 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM90A5PA8MXJ8 464 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM90A23PA8MXZ1 464 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM90A15PP0C7V4 464 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM90A13PP0C7W8 464 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM90A14PP0C7W9 464 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM90A24PP0C7X0 464 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FUT3P21217 361 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 CEACAM3P40198 252 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 EFNB2P52799 333 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 FABP5Q01469 135 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 TRAM1Q15629 374 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 TPTE2P1Q5T6R2 138 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 SLC16A12Q6ZSM3 486 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 OR2T6Q8NHC8 308 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 UBALD1Q8TB05 177 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 ARL11Q969Q4 196 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 GFI1Q99684 422 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 MMP28Q9H239 520 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 ETAA1Q9NY74 926 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 BLOC1S6Q9UL45 172 aa10.23□□□□□ -0.77
PRPF40A-203ENST00000448428 UBE2QL1A1L167 161 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 AIPO00170 330 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 SLC22A1O15245 554 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 DENRO43583 198 aaKnown RBP10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 ORC5O43913 435 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 MPIG6BO95866 241 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 GLAP06280 429 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 UBBP0CG47 229 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 VSIG8P0DPA2 414 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 PSMA1P25786 263 aaKnown RBP10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 HTR2CP28335 458 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 BRS3P32247 399 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 BLCAPP62952 87 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 EMX1Q04741 257 aaPredicted RBP10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 HABP2Q14520 560 aaPredicted RBP10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 TBCEQ15813 527 aaPredicted RBP10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 SYT6Q5T7P8 510 aaPredicted RBP10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 Q6ZS46 218 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 GAPTQ8N292 157 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 OR4K15Q8NH41 348 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 CST11Q9H112 138 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 KCNK15Q9H427 330 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 ZNF702PQ9H963 129 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 ACOT13Q9NPJ3 140 aa10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 AK6Q9Y3D8 172 aaKnown RBP10.22□□□□□ -0.77
PRPF40A-203ENST00000448428 A0A1W2PPE3 182 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 OOSP1A8MZH6 123 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 SDCBPO00560 298 aaPredicted RBP10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 TIMM23O14925 209 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 PDCD6O75340 191 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 GNG10P50151 68 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 LOXL3P58215 753 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 RPS27AP62979 156 aaKnown RBP10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 QRFPP83859 136 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 DIAPH2-AS1Q14236 149 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 SSX1Q16384 188 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 FBLN7Q53RD9 439 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 FAM53AQ6NSI3 398 aaPredicted RBP10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 TREML4Q6UXN2 200 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 ZNF367Q7RTV3 350 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 Q8N2B8 174 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 DTX3Q8N9I9 347 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 OR52M1Q8NGK5 317 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 KCNG3Q8TAE7 436 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 TRAPPC2LQ9UL33 140 aa10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 AMMECR1Q9Y4X0 333 aaPredicted RBP10.21□□□□□ -0.77
PRPF40A-203ENST00000448428 IGHV3-43A0A0B4J1X8 118 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 TMEM14DPA8MWL7 114 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 C12orf77C9JDV5 145 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 H3BUI4 141 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 CA11O75493 328 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 ARL6IP5O75915 188 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 BPNT1O95861 308 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 IGHV3-43DP0DP04 118 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 RCC1P18754 421 aaPredicted RBP10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 CALRP27797 417 aaKnown RBP10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 MNDAP41218 407 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 ARHGDIBP52566 201 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 GABARAPL2P60520 117 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 UNC119Q13432 240 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 TET2Q6N021 2002 aaPredicted RBP10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 C11orf88Q6PI97 169 aa10.2□□□□□ -0.78
PRPF40A-203ENST00000448428 OR6M1Q8NGM8 313 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms