RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PLPPR2Q96GM1 343 aa12.58□□□□□ -0.39
SF1-211ENST00000448404 MSL2Q9HCI7 577 aa12.58□□□□□ -0.39
SF1-211ENST00000448404 UBE2J1Q9Y385 318 aaPredicted RBP12.58□□□□□ -0.39
SF1-211ENST00000448404 A0A0G2JRQ6 117 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 CST4P01036 141 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 IFNA4P05014 189 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 FABP6P51161 128 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 ETV3LQ6ZN32 361 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 TMEM217Q8N7C4 229 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 OR1J1Q8NGS3 322 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 STOML3Q8TAV4 291 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 C18orf12Q96KH6 178 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 TAAR6Q96RI8 345 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 DLL3Q9NYJ7 618 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 ADAM20O43506 726 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 SMPD2O60906 423 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 LYL1P12980 280 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 AKR1C3P42330 323 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 PPP1CBP62140 327 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 NRN1LQ496H8 165 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 DHRS7BQ6IAN0 325 aaPredicted RBP12.58□□□□□ -0.4
SF1-211ENST00000448404 TMEM178AQ8NBL3 297 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 SCCPDHQ8NBX0 429 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 OR5A2Q8NGI9 324 aa12.58□□□□□ -0.4
SF1-211ENST00000448404 ERRFI1Q9UJM3 462 aaPredicted RBP12.58□□□□□ -0.4
SF1-211ENST00000448404 DOCK11Q5JSL3 2073 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 FGF16O43320 207 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 SSSCA1O60232 199 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 TK1P04183 234 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 OR8U9P0C7N5 309 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 RD3LP0DJH9 198 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 ZNF14P17017 642 aaPredicted RBP12.57□□□□□ -0.4
SF1-211ENST00000448404 CAV2P51636 162 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 LINC00205P59089 165 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 PSG7Q13046 419 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 ZNF154Q13106 437 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 HNF4GQ14541 408 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 PIP4P1Q86T03 277 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 OR8U1Q8NH10 309 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 OPN3Q9H1Y3 402 aaPredicted RBP12.57□□□□□ -0.4
SF1-211ENST00000448404 GP6Q9HCN6 339 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 ZFP57Q9NU63 452 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 MIOXQ9UGB7 285 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 MEMO1Q9Y316 297 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 CDRT15L2A8MXV6 281 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 CST7O76096 145 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 MUC1P15941 1255 aaPredicted RBP12.57□□□□□ -0.4
SF1-211ENST00000448404 ZNF16P17020 682 aaPredicted RBP12.57□□□□□ -0.4
SF1-211ENST00000448404 UBE2NP61088 152 aaKnown RBP12.57□□□□□ -0.4
SF1-211ENST00000448404 GNG3P63215 75 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 SMCO1Q147U7 214 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 PRAMEF6Q5VXH4 476 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 PCSK4Q6UW60 755 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 DPPA2Q7Z7J5 298 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 ZNF565Q8N9K5 539 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 DMBX1Q8NFW5 382 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 RNF141Q8WVD5 230 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 GTF3AQ92664 365 aaKnown RBP12.57□□□□□ -0.4
SF1-211ENST00000448404 PHYHIPLQ96FC7 376 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 ABHD14AQ9BUJ0 271 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 RSRP1Q9BUV0 290 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 OR51I2Q9H344 312 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 LPAR3Q9UBY5 353 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 TUBD1Q9UJT1 453 aa12.57□□□□□ -0.4
SF1-211ENST00000448404 RAB19A4D1S5 217 aa12.56□□□□□ -0.4
SF1-211ENST00000448404 TMEM50AO95807 157 aa12.56□□□□□ -0.4
SF1-211ENST00000448404 RNF150Q9ULK6 438 aa12.56□□□□□ -0.4
SF1-211ENST00000448404 PPP1R3CQ9UQK1 317 aa12.56□□□□□ -0.4
SF1-211ENST00000448404 TM4SF5O14894 197 aa12.56□□□□□ -0.4
SF1-211ENST00000448404 DEGS1O15121 323 aa12.56□□□□□ -0.4
SF1-211ENST00000448404 KIR2DL2P43627 348 aaPredicted RBP12.56□□□□□ -0.4
SF1-211ENST00000448404 OR2B11Q5JQS5 317 aa12.56□□□□□ -0.4
SF1-211ENST00000448404 GALNT14Q96FL9 552 aa12.56□□□□□ -0.4
SF1-211ENST00000448404 ZNF251Q9BRH9 671 aa12.56□□□□□ -0.4
SF1-211ENST00000448404 CDH20Q9HBT6 801 aa12.56□□□□□ -0.4
SF1-211ENST00000448404 TLN1Q9Y490 2541 aaKnown RBP12.55□□□□□ -0.4
SF1-211ENST00000448404 SLC34A2O95436 690 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 OR2H2O95918 312 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 TBC1D28Q2M2D7 210 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 UQCC3Q6UW78 93 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 Q6ZRG5 221 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 ZNF695Q8IW36 515 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 LGI3Q8N145 548 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 RCC2Q9P258 522 aaKnown RBP12.55□□□□□ -0.4
SF1-211ENST00000448404 H7C1Q1 480 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 CD80P33681 288 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 ZNF616Q08AN1 781 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 OBP2BQ9NPH6 170 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 TMEM100Q9NV29 134 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
SF1-211ENST00000448404 TRDCB7Z8K6 153 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 GALR2O43603 387 aaPredicted RBP12.54□□□□□ -0.4
SF1-211ENST00000448404 PSPNO60542 156 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 IGHV3-13P01766 116 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 IGHV3-7P01780 117 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 PET100P0DJ07 73 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 COX5BP10606 129 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 HABP2Q14520 560 aaPredicted RBP12.54□□□□□ -0.4
SF1-211ENST00000448404 FAM214BQ7L5A3 538 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 Q8NFD4 153 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms