RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 OR4A4PQ8NGN8 299 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 OR1L1Q8NH94 360 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 CA5BP1Q8WTZ4 195 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 ADAT3Q96EY9 351 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-204ENST00000448183 TBX15Q96SF7 602 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 C5orf52A6NGY3 159 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 MS4A18H0YCH9 400 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 K7ERU9 68 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 ERVH48-1M5A8F1 160 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 PITX3O75364 302 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 SRSF10O75494 262 aaKnown RBP6.82□□□□□ -1.32
NEDD9-204ENST00000448183 WISP3O95389 354 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-204ENST00000448183 HIST1H1EP10412 219 aaKnown RBP6.82□□□□□ -1.32
NEDD9-204ENST00000448183 MNX1P50219 401 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-204ENST00000448183 NANOS3P60323 173 aaKnown RBP6.82□□□□□ -1.32
NEDD9-204ENST00000448183 RPL30P62888 115 aaKnown RBP6.82□□□□□ -1.32
NEDD9-204ENST00000448183 TNXAQ16473 311 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 MS4A18Q3C1V0 323 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 VAX1Q5SQQ9 334 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 COL5A1-AS1Q5SY13 56 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 ZNF660Q6AZW8 331 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-204ENST00000448183 BPIFA4PQ86YQ2 179 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 LRRC75AQ8NAA5 344 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 ZNF519Q8TB69 540 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 ADIPOR1Q96A54 375 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 NRTNQ99748 197 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 ELOVL1Q9BW60 279 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 HSPB8Q9UJY1 196 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 KLK13Q9UKR3 277 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 PRNDQ9UKY0 176 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 UFC1Q9Y3C8 167 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 TRPM6Q9BX84 2022 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 CDIPTO14735 213 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 TNFSF14O43557 240 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 CELA2BP08218 269 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-204ENST00000448183 COX7A1P24310 79 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 PSMB2P49721 201 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 SGMS2Q8NHU3 365 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 PERPQ96FX8 193 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 RPP25Q9BUL9 199 aaKnown RBP6.82□□□□□ -1.32
NEDD9-204ENST00000448183 CLEC1BQ9P126 229 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 NAGKQ9UJ70 344 aa6.82□□□□□ -1.32
NEDD9-204ENST00000448183 A0A1W2PPV9 198 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 DIRC3C9JPN6 131 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 RPL36A-HNRNPH2H7BZ11 118 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 PNLIPP16233 465 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 COL9A1P20849 921 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 NPY1RP25929 384 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 NXPH1P58417 271 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 HERVK_113P61574 105 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 PIGYQ3MUY2 71 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 DOLPP1Q86YN1 238 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 WDFY1Q8IWB7 410 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 CYB561D1Q8N8Q1 229 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 OR5A2Q8NGI9 324 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 ZDHHC16Q969W1 377 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 PGLYRP3Q96LB9 341 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 GPX7Q96SL4 187 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-204ENST00000448183 GABRG3Q99928 467 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 ZFC3H1O60293 1989 aaKnown RBP6.81□□□□□ -1.32
NEDD9-204ENST00000448183 A0A1W2PPC1 479 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 APCSP02743 223 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 ACP1P24666 158 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 PAFAH1B2P68402 229 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 DGAT2L7PQ6IED9 249 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 OR2D3Q8NGH3 330 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 ADAMTS17Q8TE56 1095 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 LRRC3BQ96PB8 259 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 OR2V2Q96R30 315 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 SLC25A33Q9BSK2 321 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 PLA2G2FQ9BZM2 168 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 OR2H1Q9GZK4 316 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 SLC26A1Q9H2B4 701 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 CLEC5AQ9NY25 188 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 TRAV38-1A0A0B4J264 116 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 IFITM10A6NMD0 228 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 HRKO00198 91 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 CD40P25942 277 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 BRS3P32247 399 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 KIR3DL2P43630 455 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 C21orf62-AS1Q17RA5 79 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 TEPPQ6URK8 271 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 TMEM92Q6UXU6 159 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 C16orf82Q7Z2V1 217 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 MRPS18BQ9Y676 258 aaKnown RBP6.81□□□□□ -1.32
NEDD9-204ENST00000448183 CYB5R3P00387 301 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-204ENST00000448183 OR4A8P0C604 315 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 FSTP19883 344 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 EPHA8P29322 1005 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-204ENST00000448183 GAB4Q2WGN9 574 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 SLC23A3Q6PIS1 610 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 OR4X1Q8NH49 305 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 ATG101Q9BSB4 218 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 GLRX2Q9NS18 164 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 KCNK7Q9Y2U2 307 aa6.81□□□□□ -1.32
NEDD9-204ENST00000448183 GNG7O60262 68 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 ORM1P02763 201 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 PSG2P11465 335 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 HYAL1Q12794 435 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 C9orf50Q5SZB4 431 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms