RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 ZFHX2Q9C0A1 2572 aaPredicted RBP6.37□□□□□ -1.39
SYNE1-213ENST00000448038 ADRB1P08588 477 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 FGF2P09038 288 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 ERVS71-1P61550 626 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 SOHLH1Q5JUK2 328 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 LCN15Q6UWW0 184 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 GLRX5Q86SX6 157 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 GGNQ86UU5 652 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 PRSS33Q8NF86 280 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 OR13D1Q8NGV5 346 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 MARC2Q969Z3 335 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 MALSU1Q96EH3 234 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 PRO3102Q9H379 93 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 OPN1MWP04001 364 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 OPN1MW2P0DN77 364 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 OPN1MW3P0DN78 364 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 FGF7P21781 194 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 BRS3P32247 399 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 GAS1P54826 345 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 MPPED2Q15777 294 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 ACOT6Q3I5F7 207 aaPredicted RBP6.37□□□□□ -1.39
SYNE1-213ENST00000448038 SLC25A42Q86VD7 318 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 LFNGQ8NES3 379 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 OR4D10Q8NGI6 311 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 TMEM230Q96A57 120 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 R3HDM4Q96D70 268 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 PIPOXQ9P0Z9 390 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 PRELID1Q9Y255 219 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 CLDN16Q9Y5I7 305 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 MUC6Q6W4X9 2439 aa6.37□□□□□ -1.39
SYNE1-213ENST00000448038 TECTAO75443 2155 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 hCG_38984A0A1B0GV85 526 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A10PA6NDY2 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A18PA6NE21 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A16PA6NEW6 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A20PA6NIJ5 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A8PA6NJQ4 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A7PA6NKC0 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A22PA8MWA6 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A12PA8MX19 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A5PA8MXJ8 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A23PA8MXZ1 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM157AC9JC47 383 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A15PP0C7V4 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A13PP0C7W8 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A14PP0C7W9 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FAM90A24PP0C7X0 464 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 NPBWR2P48146 333 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 UBE2KP61086 200 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 SPINK9Q5DT21 86 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 LIAT1Q6ZQX7 453 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 SAXO1Q8IYX7 474 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 MDS2Q8NDY4 140 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 SNX22Q96L94 193 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 MSRB2Q9Y3D2 182 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 INSIG2Q9Y5U4 225 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 FREM3P0C091 2139 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 UBE2L5PA0A1B0GUS4 154 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 A0A1W2PPE3 182 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 BCL2L11O43521 198 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 COX5AP20674 150 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 MPV17P39210 176 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 NBL1P41271 181 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 TMEM267Q0VDI3 215 aaPredicted RBP6.36□□□□□ -1.39
SYNE1-213ENST00000448038 OR5P3Q8WZ94 311 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 SNRNP40Q96DI7 357 aaKnown RBP6.36□□□□□ -1.39
SYNE1-213ENST00000448038 AKR1E2Q96JD6 320 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 NEURL2Q9BR09 285 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 ACTR3CQ9C0K3 210 aaPredicted RBP6.36□□□□□ -1.39
SYNE1-213ENST00000448038 SLC25A32Q9H2D1 315 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 DLL3Q9NYJ7 618 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 IGHV2OR16-5A0A0B4J2B6 119 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 IFNL4K9M1U5 179 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 MPC2O95563 127 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 CELA3BP08861 270 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 TAS2R45P59539 299 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 TAGLNQ01995 201 aaKnown RBP6.36□□□□□ -1.39
SYNE1-213ENST00000448038 UNQ6494/PRO21346Q6UXR6 183 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 SVBPQ8N300 66 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 RELL2Q8NC24 303 aaPredicted RBP6.36□□□□□ -1.39
SYNE1-213ENST00000448038 ADAD2Q8NCV1 583 aaKnown RBP6.36□□□□□ -1.39
SYNE1-213ENST00000448038 RGP1Q92546 391 aaPredicted RBP6.36□□□□□ -1.39
SYNE1-213ENST00000448038 ZNF714Q96N38 554 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 PCGF1Q9BSM1 259 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 RPS10-NUDT3A0A1W2PQS6 291 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 B9A039 149 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 CST4P01036 141 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 HBZP02008 142 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 CRYBA1P05813 215 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 APOBEC3AP31941 199 aaPredicted RBP6.36□□□□□ -1.39
SYNE1-213ENST00000448038 HTD2P86397 168 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 IGSF11Q5DX21 431 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 VSTM2AQ8TAG5 236 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 LHX4Q969G2 390 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 HSD17B10Q99714 261 aaKnown RBP6.36□□□□□ -1.39
SYNE1-213ENST00000448038 SOX7Q9BT81 388 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 C1QTNF5Q9BXJ0 243 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 V9GYS6 101 aa6.36□□□□□ -1.39
SYNE1-213ENST00000448038 MBP02144 154 aa6.35□□□□□ -1.39
SYNE1-213ENST00000448038 SLC25A6P12236 298 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms