RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 MPPED1O15442 326 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 RLN2P04090 185 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 GLAP06280 429 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 CTXN2P0C2S0 81 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 IGKV1-13P0DP09 117 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 ZNF345Q14585 488 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 ZNF146Q15072 292 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 MSMPQ1L6U9 139 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 ZNF818PQ6ZRF7 136 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 TBC1D26Q86UD7 250 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 GAPTQ8N292 157 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 FAM169BQ8N8A8 192 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 BOLLQ8N9W6 283 aaKnown RBP8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 GLYATL2Q8WU03 294 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 TP53RKQ96S44 253 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 CCL28Q9NRJ3 127 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 RAXQ9Y2V3 346 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 HSPA12AO43301 675 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 BCL2L11O43521 198 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 PSPNO60542 156 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 NMBP08949 121 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 HLA-DRB3P79483 266 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 PRSS54Q6PEW0 395 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 WDR82Q6UXN9 313 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 LIAT1Q6ZQX7 453 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 OR4A4PQ8NGN8 299 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 SCARB1Q8WTV0 552 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 ST8SIA2Q92186 375 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 RRNAD1Q96FB5 475 aaKnown RBP8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 GALNT14Q96FL9 552 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 SUCNR1Q9BXA5 334 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 OR1A1Q9P1Q5 309 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 ERRFI1Q9UJM3 462 aaPredicted RBP8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 UBE2J1Q9Y385 318 aaPredicted RBP8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 LSM5Q9Y4Y9 91 aaKnown RBP8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 INTS1Q8N201 2190 aaKnown RBP8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 LGALS8O00214 317 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 SPRY3O43610 288 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 MDH2P40926 338 aaKnown RBP8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 TMPRSS3P57727 454 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 PCSK4Q6UW60 755 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 ZNF497Q6ZNH5 498 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 C1orf174Q8IYL3 243 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 LGI3Q8N145 548 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 STPG2Q8N412 459 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 RELL2Q8NC24 303 aaPredicted RBP8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 OR1S1Q8NH92 325 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 TAAR3PQ9P1P4 343 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 PCDHB10Q9UN67 800 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 PRELID3BQ9Y3B1 194 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 RBM7Q9Y580 266 aaKnown RBP8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 APC2O95996 2303 aa8.04□□□□□ -1.12
COL6A4P1-201ENST00000446690 TRBV6-6A0A0A6YYG2 114 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 MEX3AA1L020 520 aaKnown RBP8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 TEX46H3BTG2 121 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 H7C1Q1 480 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 GPR31O00270 319 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 B3GALNT1O75752 331 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 PTBP3O95758 552 aaKnown RBP8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 FGF2P09038 288 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 PET100P0DJ07 73 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 KLF3P57682 345 aaPredicted RBP8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 UBA52P62987 128 aaKnown RBP8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 AESQ08117 197 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 FAM74A1Q5RGS3 127 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 TMEM268Q5VZI3 342 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 ACP7Q6ZNF0 438 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 CMTM1Q8IZ96 169 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 LRRC29Q8WV35 223 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 MSI2Q96DH6 328 aaKnown RBP8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 HES4Q9HCC6 221 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 PRR14LQ5THK1 2151 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 TRBV6-7A0A0A0MS04 114 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 MSGN1A6NI15 193 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 ZNF98A6NK75 572 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 GLRXP35754 106 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 KCNJ3P48549 501 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 MZT1Q08AG7 82 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 ESPL1Q14674 2120 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 SMCO1Q147U7 214 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 ZNF880Q6PDB4 577 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 WFDC8Q8IUA0 241 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 ZNF695Q8IW36 515 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 SLC35G3Q8N808 338 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 C18orf12Q96KH6 178 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 USB1Q9BQ65 265 aaKnown RBP8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 PIGMQ9H3S5 423 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 TAF9BQ9HBM6 251 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 OR2W1Q9Y3N9 320 aa8.03□□□□□ -1.12
COL6A4P1-201ENST00000446690 C16orf97H3BN30 126 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 TUSC2O75896 110 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 ACAA1P09110 424 aaPredicted RBP8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 CEACAM6P40199 344 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 COL10A1Q03692 680 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 IL15RAQ13261 267 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 SPRNQ5BIV9 151 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 ATRAIDQ6UW56 229 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 MRGPRGQ86SM5 289 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 FAM185AQ8N0U4 392 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 TPRX1Q8N7U7 411 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms