RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 VN1R4Q7Z5H5 301 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 OR2V1Q8NHB1 315 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 TMEM222Q9H0R3 208 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 RICTORQ6R327 1708 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 NDUFB4O95168 129 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 HTR1DP28221 377 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 RUNX1Q01196 453 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 NUDT10Q8NFP7 164 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 THAP10Q9P2Z0 257 aaPredicted RBP6.91□□□□□ -1.3
SMG1-202ENST00000446231 KBTBD11O94819 623 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 METAP1P53582 386 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 VSTM2LQ96N03 204 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 PTRH2Q9Y3E5 179 aaKnown RBP6.91□□□□□ -1.3
SMG1-202ENST00000446231 EN2P19622 333 aaPredicted RBP6.91□□□□□ -1.3
SMG1-202ENST00000446231 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.91□□□□□ -1.3
SMG1-202ENST00000446231 OR8G5Q8NG78 346 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 MAP1LC3CQ9BXW4 147 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 DOCK2Q92608 1830 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 CT62P0C5K7 136 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 IRF2P14316 349 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 EIF3IQ13347 325 aaKnown RBP6.91□□□□□ -1.3
SMG1-202ENST00000446231 SLC45A2Q9UMX9 530 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 E9PQ18 207 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 MPLP40238 635 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 NHLH1Q02575 133 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 PRAMEF5Q5TYX0 476 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 PRAMEF6Q5VXH4 476 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 CYTL1Q9NRR1 136 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 ARFGEF1Q9Y6D6 1849 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 GFI1Q99684 422 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 TRBV6-7A0A0A0MS04 114 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 CENPVL1A0A0U1RR11 272 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 SLC25A34Q6PIV7 304 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 P2RX4Q99571 388 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 SHBQ15464 509 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 MESP1Q9BRJ9 268 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 LCN2P80188 198 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 CXorf66Q5JRM2 361 aaPredicted RBP6.9□□□□□ -1.3
SMG1-202ENST00000446231 VHLLQ6RSH7 139 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.9□□□□□ -1.32e-6■□□□□ 8.9
SMG1-202ENST00000446231 ZNF664Q8N3J9 261 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 TRAV9-2A0A087WT02 112 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 ALG1L2C9J202 215 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 CYR61O00622 381 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 TNFSF13O75888 250 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 OR4A8P0C604 315 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 TMEM250H0YL14 139 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 GCH1P30793 250 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 TMEM187Q14656 261 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 MRPL18Q9H0U6 180 aaKnown RBP6.9□□□□□ -1.3
SMG1-202ENST00000446231 GREM1O60565 184 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 CT45A10P0DMU9 189 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 CDC34P49427 236 aaPredicted RBP6.9□□□□□ -1.3
SMG1-202ENST00000446231 RAC1P63000 192 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 PRSS27Q9BQR3 290 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 ZNF665Q9H7R5 613 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 C4orf47A7E2U8 309 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 SSR4P51571 173 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 UBE2G1P62253 170 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 PMCHL1Q16048 86 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 MRGPRX4Q96LA9 322 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 B3GAT1Q9P2W7 334 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 FOXD3Q9UJU5 478 aaPredicted RBP6.9□□□□□ -1.3
SMG1-202ENST00000446231 LRP5O75197 1615 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 IGHV3-20A0A0C4DH32 117 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 H3BMH7 237 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 VAMP5O95183 116 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 PPYP01298 95 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 LPAR2Q9HBW0 351 aa6.9□□□□□ -1.3
SMG1-202ENST00000446231 AMY1AP04745 511 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 CD226Q15762 336 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 NIT1Q86X76 327 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 GPR27Q9NS67 375 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 H0YIG0 161 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 NPIPB7O75200 414 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 BARX1Q9HBU1 254 aaPredicted RBP6.9□□□□□ -1.31
SMG1-202ENST00000446231 MRPS17Q9Y2R5 130 aaKnown RBP6.9□□□□□ -1.31
SMG1-202ENST00000446231 A0A1W2PNR3 127 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 SYNGR2O43760 224 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 UBE2V1Q13404 147 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 ZNF774Q6NX45 483 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 RNF133Q8WVZ7 376 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 COL25A1Q9BXS0 654 aaPredicted RBP6.9□□□□□ -1.31
SMG1-202ENST00000446231 ZNF732B4DXR9 585 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 EREGO14944 169 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 BGLAPP02818 100 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 EXT1Q16394 746 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 C9orf135Q5VTT2 229 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 KIAA0895LQ68EN5 471 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 CDC42EP3Q9UKI2 254 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 DHRS3O75911 302 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 FOXF1Q12946 379 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 GBGT1Q8N5D6 347 aa6.9□□□□□ -1.31
SMG1-202ENST00000446231 G3V3Y1 287 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 RHBDL1O75783 438 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 CT45A6P0DMU7 189 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 CT45A5P0DMU8 189 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 CT45A7P0DMV0 189 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 CT45A1Q5HYN5 189 aa6.89□□□□□ -1.31
SMG1-202ENST00000446231 CT45A3Q8NHU0 189 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms