RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 LUZP4Q9P127 313 aa15.14■□□□□ 0.01
CLDN9-201ENST00000445369 CACFD1Q9UGQ2 172 aa15.14■□□□□ 0.01
CLDN9-201ENST00000445369 A0A1W2PR80 420 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 NPIPB11E5RHQ5 1161 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 MDH2P40926 338 aaKnown RBP15.13■□□□□ 0.01
CLDN9-201ENST00000445369 RAB5CP51148 216 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 IDH3GP51553 393 aaPredicted RBP15.13■□□□□ 0.01
CLDN9-201ENST00000445369 MRPL49Q13405 166 aaKnown RBP15.13■□□□□ 0.01
CLDN9-201ENST00000445369 CXorf66Q5JRM2 361 aaPredicted RBP15.13■□□□□ 0.01
CLDN9-201ENST00000445369 COMMD1Q8N668 190 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 CDH20Q9HBT6 801 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 LYRM2Q9NU23 88 aaPredicted RBP15.13■□□□□ 0.01
CLDN9-201ENST00000445369 TREM2Q9NZC2 230 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 TNFSF12O43508 249 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 SSSCA1O60232 199 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 PITX3O75364 302 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 F2RP25116 425 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 LMO1P25800 156 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 SNCAP37840 140 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 UBE2NP61088 152 aaKnown RBP15.13■□□□□ 0.01
CLDN9-201ENST00000445369 ERVS71-1P61550 626 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 ID3Q02535 119 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 TGFBR3Q03167 851 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 HFEQ30201 348 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 Q8IYB0 196 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 HSD17B11Q8NBQ5 300 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 SCCPDHQ8NBX0 429 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 NDRG3Q9UGV2 375 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 POLDIP2Q9Y2S7 368 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 STRAPQ9Y3F4 350 aaKnown RBP15.13■□□□□ 0.01
CLDN9-201ENST00000445369 FAM186AA6NE01 2351 aa15.13■□□□□ 0.01
CLDN9-201ENST00000445369 TSPAN15O95858 294 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 WNT2P09544 360 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 CAMLGP49069 296 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 GUSBP1Q15486 140 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 SHEQ5VZ18 495 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 MOB1BQ7L9L4 216 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 GCNT2Q8N0V5 402 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 SCRT1Q9BWW7 348 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 PLEKHF2Q9H8W4 249 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 C19orf12Q9NSK7 152 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 SLC33A1O00400 549 aaPredicted RBP15.12■□□□□ 0.01
CLDN9-201ENST00000445369 NKX2-8O15522 239 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 LYZL6O75951 148 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 OR2H2O95918 312 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 MMP9P14780 707 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 FHITP49789 147 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 ASCL1P50553 236 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 ZNF616Q08AN1 781 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 SRSF6Q13247 344 aaKnown RBP15.12■□□□□ 0.01
CLDN9-201ENST00000445369 ZNF266Q14584 549 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 TMEM252Q8N6L7 170 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 MAGT1Q9H0U3 335 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 OR1A1Q9P1Q5 309 aa15.12■□□□□ 0.01
CLDN9-201ENST00000445369 IQCF6A8MYZ5 107 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 C1QL1O75973 258 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 PGA5P0DJD9 388 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 RAC2P15153 192 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 S100GP29377 79 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 ZNF154Q13106 437 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 GABRA6Q16445 453 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 ALKBH6Q3KRA9 238 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 ZNF497Q6ZNH5 498 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 FAM214BQ7L5A3 538 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 ODF3L1Q8IXM7 274 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 FDCSPQ8NFU4 85 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 SLC25A40Q8TBP6 338 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 SLC25A31Q9H0C2 315 aa15.11■□□□□ 0.01
CLDN9-201ENST00000445369 ERRFI1Q9UJM3 462 aaPredicted RBP15.11■□□□□ 0.01
CLDN9-201ENST00000445369 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.1■□□□□ 0.01
CLDN9-201ENST00000445369 K7N7A8 449 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 SIRPB1O00241 398 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 TMEM50AO95807 157 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 VAMP2P63027 116 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 Q6ZT83 130 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 OR10V1Q8NGI7 309 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 TMEM171Q8WVE6 324 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 TRIB1Q96RU8 372 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 TAAR3PQ9P1P4 343 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 PROB1E7EW31 1015 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 HEXAP06865 529 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 CCL11P51671 97 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 CLINT1Q14677 625 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 ZNF146Q15072 292 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 INO80CQ6PI98 192 aaPredicted RBP15.1■□□□□ 0.01
CLDN9-201ENST00000445369 IL1F10Q8WWZ1 152 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 AIFM2Q9BRQ8 373 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 RNF115Q9Y4L5 304 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 TTC28Q96AY4 2481 aa15.1■□□□□ 0.01
CLDN9-201ENST00000445369 A0A0G2JRQ6 117 aa15.09■□□□□ 0.01
CLDN9-201ENST00000445369 IGLV2-14P01704 120 aa15.09■□□□□ 0.01
CLDN9-201ENST00000445369 PRH1P02810 166 aa15.09■□□□□ 0.01
CLDN9-201ENST00000445369 TESK1Q15569 626 aa15.09■□□□□ 0.01
CLDN9-201ENST00000445369 IGFL2Q6UWQ7 119 aa15.09■□□□□ 0.01
CLDN9-201ENST00000445369 TMEM182Q6ZP80 229 aaPredicted RBP15.09■□□□□ 0.01
CLDN9-201ENST00000445369 OR1J1Q8NGS3 322 aa15.09■□□□□ 0.01
CLDN9-201ENST00000445369 ASCL3Q9NQ33 180 aa15.09■□□□□ 0.01
CLDN9-201ENST00000445369 KPTNQ9Y664 436 aa15.09■□□□□ 0.01
CLDN9-201ENST00000445369 TRAV39A0A0B4J263 110 aa15.08■□□□□ 0.01
CLDN9-201ENST00000445369 CDIPTO14735 213 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms