RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 ERVS71-1P61550 626 aa12□□□□□ -0.49
NCLP1-201ENST00000445357 GNMTQ14749 295 aa12□□□□□ -0.49
NCLP1-201ENST00000445357 NMSQ5H8A3 153 aa12□□□□□ -0.49
NCLP1-201ENST00000445357 LYPD6BQ8NI32 183 aa12□□□□□ -0.49
NCLP1-201ENST00000445357 WNT2BQ93097 391 aa12□□□□□ -0.49
NCLP1-201ENST00000445357 KIRREL1Q96J84 757 aa12□□□□□ -0.49
NCLP1-201ENST00000445357 GINS3Q9BRX5 216 aa12□□□□□ -0.49
NCLP1-201ENST00000445357 WFDC1Q9HC57 220 aa12□□□□□ -0.49
NCLP1-201ENST00000445357 HSD17B6O14756 317 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 TSPAN4O14817 238 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 FBXO24O75426 580 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 CEACAM4O75871 244 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 IGKV3-15P01624 115 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 NKX2-1P43699 371 aaPredicted RBP11.99□□□□□ -0.49
NCLP1-201ENST00000445357 SRSF3P84103 164 aaKnown RBP11.99□□□□□ -0.49
NCLP1-201ENST00000445357 PSG7Q13046 419 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 ZNF146Q15072 292 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 IGFBP7Q16270 282 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 C9orf106Q8NAJ2 232 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 OR1J1Q8NGS3 322 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 OR10J5Q8NHC4 309 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 TSNAXQ99598 290 aaKnown RBP11.99□□□□□ -0.49
NCLP1-201ENST00000445357 HRH4Q9H3N8 390 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 PIGBOS1A0A0B4J2F0 54 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 SLC33A1O00400 549 aaPredicted RBP11.99□□□□□ -0.49
NCLP1-201ENST00000445357 PGLYRP1O75594 196 aaPredicted RBP11.99□□□□□ -0.49
NCLP1-201ENST00000445357 WISP2O76076 250 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 OR2H2O95918 312 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 VDAC1P21796 283 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 AKR1C2P52895 323 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 F2RL1P55085 397 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 AKR1C1Q04828 323 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 ZNF154Q13106 437 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 ALKBH6Q3KRA9 238 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 ZNF497Q6ZNH5 498 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 SPAG16Q8N0X2 631 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 SVBPQ8N300 66 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 WDR31Q8NA23 367 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 FAM212BQ9NTI7 297 aaPredicted RBP11.99□□□□□ -0.49
NCLP1-201ENST00000445357 UQCC1Q9NVA1 299 aa11.99□□□□□ -0.49
NCLP1-201ENST00000445357 URB1O60287 2271 aaKnown RBP11.99□□□□□ -0.49
NCLP1-201ENST00000445357 C3orf80F5H4A9 247 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 MMP9P14780 707 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 F2RP25116 425 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 S100GP29377 79 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 EWSR1Q01844 656 aaKnown RBP eCLIP11.98□□□□□ -0.49
NCLP1-201ENST00000445357 VWA1Q6PCB0 445 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 Q6ZRG5 221 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 OR2C3Q8N628 320 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 CNEP1R1Q8N9A8 125 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 PLPPR1Q8TBJ4 325 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 SEC11CQ9BY50 192 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.98□□□□□ -0.49
NCLP1-201ENST00000445357 SIRPB1O00241 398 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 ADAM20O43506 726 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 SPP1P10451 314 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 MUC1P15941 1255 aaPredicted RBP11.98□□□□□ -0.49
NCLP1-201ENST00000445357 PVALBP20472 110 aaPredicted RBP11.98□□□□□ -0.49
NCLP1-201ENST00000445357 TUBG1P23258 451 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 ACSF3Q4G176 576 aaPredicted RBP11.98□□□□□ -0.49
NCLP1-201ENST00000445357 CLEC9AQ6UXN8 241 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 PUSL1Q8N0Z8 303 aaKnown RBP11.98□□□□□ -0.49
NCLP1-201ENST00000445357 KLF14Q8TD94 323 aaPredicted RBP11.98□□□□□ -0.49
NCLP1-201ENST00000445357 HES4Q9HCC6 221 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 TREM1Q9NP99 234 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 TUBG2Q9NRH3 451 aa11.98□□□□□ -0.49
NCLP1-201ENST00000445357 MBNL3Q9NUK0 354 aaKnown RBP11.98□□□□□ -0.49
NCLP1-201ENST00000445357 CDIPTO14735 213 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 CD5P06127 495 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 DANCRP0C864 163 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 HOXC12P31275 282 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 MPV17P39210 176 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 ARHGDIBP52566 201 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 ID3Q02535 119 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 NHLH2Q02577 135 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 OR8G1Q15617 311 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 GUCA2BQ16661 112 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 SWI5Q1ZZU3 235 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 OR10V1Q8NGI7 309 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 GPHA2Q96T91 129 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 LYRM2Q9NU23 88 aaPredicted RBP11.97□□□□□ -0.49
NCLP1-201ENST00000445357 WIPI2Q9Y4P8 454 aa11.97□□□□□ -0.49
NCLP1-201ENST00000445357 ZNF891A8MT65 544 aaPredicted RBP11.96□□□□□ -0.49
NCLP1-201ENST00000445357 C1QTNF9BB2RNN3 333 aa11.96□□□□□ -0.49
NCLP1-201ENST00000445357 F8W036 122 aa11.96□□□□□ -0.49
NCLP1-201ENST00000445357 NXPH2O95156 264 aa11.96□□□□□ -0.49
NCLP1-201ENST00000445357 SLC25A6P12236 298 aa11.96□□□□□ -0.49
NCLP1-201ENST00000445357 POLR2GP62487 172 aaKnown RBP eCLIP11.96□□□□□ -0.49
NCLP1-201ENST00000445357 HMGN3Q15651 99 aa11.96□□□□□ -0.49
NCLP1-201ENST00000445357 DEFB109BQ30KR1 87 aa11.96□□□□□ -0.49
NCLP1-201ENST00000445357 OR8G5Q8NG78 346 aa11.96□□□□□ -0.49
NCLP1-201ENST00000445357 AKR1E2Q96JD6 320 aa11.96□□□□□ -0.49
NCLP1-201ENST00000445357 PLSCR4Q9NRQ2 329 aa11.96□□□□□ -0.49
NCLP1-201ENST00000445357 ERRFI1Q9UJM3 462 aaPredicted RBP11.96□□□□□ -0.49
NCLP1-201ENST00000445357 INTS1Q8N201 2190 aaKnown RBP11.96□□□□□ -0.5
NCLP1-201ENST00000445357 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.96□□□□□ -0.5
NCLP1-201ENST00000445357 IGSF23A1L1A6 192 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 FAM74A7A6NL05 159 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 AHRRA9YTQ3 701 aa11.96□□□□□ -0.5
NCLP1-201ENST00000445357 TRIM77I1YAP6 450 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms