RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ACTL6AO96019 429 aa16.36■□□□□ 0.21
SHANK3-203ENST00000445220 COL8A1P27658 744 aa16.36■□□□□ 0.21
SHANK3-203ENST00000445220 AESQ08117 197 aa16.36■□□□□ 0.21
SHANK3-203ENST00000445220 LYG1Q8N1E2 194 aa16.36■□□□□ 0.21
SHANK3-203ENST00000445220 FAM181AQ8N9Y4 354 aa16.36■□□□□ 0.21
SHANK3-203ENST00000445220 AQP10Q96PS8 301 aa16.36■□□□□ 0.21
SHANK3-203ENST00000445220 SPOCK3Q9BQ16 436 aa16.36■□□□□ 0.21
SHANK3-203ENST00000445220 TUBD1Q9UJT1 453 aa16.36■□□□□ 0.21
SHANK3-203ENST00000445220 OR8A1Q8NGG7 326 aa16.35■□□□□ 0.21
SHANK3-203ENST00000445220 OR52L2PQ8NGH6 319 aa16.35■□□□□ 0.21
SHANK3-203ENST00000445220 ASB10Q8WXI3 467 aa16.35■□□□□ 0.21
SHANK3-203ENST00000445220 KLK2P20151 261 aa16.35■□□□□ 0.21
SHANK3-203ENST00000445220 R4GN57 208 aa16.35■□□□□ 0.21
SHANK3-203ENST00000445220 H3BVH4 76 aa16.35■□□□□ 0.21
SHANK3-203ENST00000445220 R3HDM4Q96D70 268 aa16.35■□□□□ 0.21
SHANK3-203ENST00000445220 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
SHANK3-203ENST00000445220 COMPP49747 757 aaPredicted RBP16.35■□□□□ 0.21
SHANK3-203ENST00000445220 ATG4DQ86TL0 474 aaPredicted RBP16.35■□□□□ 0.21
SHANK3-203ENST00000445220 MTURNQ8N3F0 131 aa16.35■□□□□ 0.21
SHANK3-203ENST00000445220 SMCHD1A6NHR9 2005 aa16.35■□□□□ 0.21
SHANK3-203ENST00000445220 A0A1W2PR80 420 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 HOXB1P14653 301 aaPredicted RBP16.34■□□□□ 0.21
SHANK3-203ENST00000445220 CA6P23280 308 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 EIF3IQ13347 325 aaKnown RBP16.34■□□□□ 0.21
SHANK3-203ENST00000445220 OR4A4PQ8NGN8 299 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 SSMEM1Q8WWF3 244 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 TMEM204Q9BSN7 226 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 A0A0B4J293 547 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 H0YL77 283 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 TNFSF15O95150 251 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 TRGC1P0CF51 173 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 VN1R4Q7Z5H5 301 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 OR4S2Q8NH73 311 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 PTPMT1Q8WUK0 201 aaPredicted RBP16.34■□□□□ 0.21
SHANK3-203ENST00000445220 RSG1Q9BU20 258 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 IGHV1OR21-1A0A087WYE8 117 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 ZNF729A6NN14 1252 aaPredicted RBP16.34■□□□□ 0.21
SHANK3-203ENST00000445220 C1QL1O75973 258 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 PRF1P14222 555 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 GGTLC2Q14390 218 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 P2RX4Q99571 388 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 ARRDC1-AS1Q9H2J1 176 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 IL36GQ9NZH8 169 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 CDC42EP3Q9UKI2 254 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 H2BFSP57053 126 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 RUNX1Q01196 453 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 SLC35E4Q6ICL7 350 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 OR6X1Q8NH79 312 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 AP5S1Q9NUS5 200 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 PIPOXQ9P0Z9 390 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 UBR3Q6ZT12 1888 aa16.34■□□□□ 0.21
SHANK3-203ENST00000445220 MEF2BQ02080 365 aaPredicted RBP16.33■□□□□ 0.21
SHANK3-203ENST00000445220 NUP214P35658 2090 aaPredicted RBP16.33■□□□□ 0.21
SHANK3-203ENST00000445220 SOD3P08294 240 aa16.33■□□□□ 0.21
SHANK3-203ENST00000445220 ORM2P19652 201 aa16.33■□□□□ 0.21
SHANK3-203ENST00000445220 GAMTQ14353 236 aa16.33■□□□□ 0.21
SHANK3-203ENST00000445220 ZNF766Q5HY98 468 aa16.33■□□□□ 0.21
SHANK3-203ENST00000445220 OR2A4O95047 310 aa16.33■□□□□ 0.2
SHANK3-203ENST00000445220 CT62P0C5K7 136 aa16.33■□□□□ 0.2
SHANK3-203ENST00000445220 MRGPRFQ96AM1 343 aa16.33■□□□□ 0.2
SHANK3-203ENST00000445220 ADTRPQ96IZ2 230 aa16.33■□□□□ 0.2
SHANK3-203ENST00000445220 OR2A7Q96R45 310 aa16.33■□□□□ 0.2
SHANK3-203ENST00000445220 HBZP02008 142 aa16.33■□□□□ 0.2
SHANK3-203ENST00000445220 NANOS3P60323 173 aaKnown RBP16.33■□□□□ 0.2
SHANK3-203ENST00000445220 TXNDC17Q9BRA2 123 aa16.33■□□□□ 0.2
SHANK3-203ENST00000445220 P4HTMQ9NXG6 502 aa16.33■□□□□ 0.2
SHANK3-203ENST00000445220 Q5BKY6 102 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 TMEM252Q8N6L7 170 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 SLC25A33Q9BSK2 321 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 SEBOXQ9HB31 216 aaPredicted RBP16.32■□□□□ 0.2
SHANK3-203ENST00000445220 CES1P1Q9UKY3 287 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 WIPI2Q9Y4P8 454 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 RPP25Q9BUL9 199 aaKnown RBP16.32■□□□□ 0.2
SHANK3-203ENST00000445220 SLC22A20A6NK97 555 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 A8MXK9 166 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 LINC00587B1AMM8 73 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 M0R1B8 84 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 HKR1P10072 659 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 MFAP2P55001 183 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 LSM6P62312 80 aaKnown RBP16.32■□□□□ 0.2
SHANK3-203ENST00000445220 SPEM2Q0P670 501 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 CYB5R2Q6BCY4 276 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 SSX8Q7RTT4 187 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 PRSS41Q7RTY9 318 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 OR5A2Q8NGI9 324 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 GPR132Q9UNW8 380 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 CARHSP1Q9Y2V2 147 aaKnown RBP16.32■□□□□ 0.2
SHANK3-203ENST00000445220 ATP23Q9Y6H3 246 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 CXorf67Q86X51 503 aaPredicted RBP16.32■□□□□ 0.2
SHANK3-203ENST00000445220 RNF133Q8WVZ7 376 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 SAP30LQ9HAJ7 183 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 MPC1Q9Y5U8 109 aa16.32■□□□□ 0.2
SHANK3-203ENST00000445220 IGHV3-43A0A0B4J1X8 118 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 IGHV3-43DP0DP04 118 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 MOB3BQ86TA1 216 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 OR2W1Q9Y3N9 320 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
SHANK3-203ENST00000445220 IGHV5-51A0A0C4DH38 117 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 NXPH1P58417 271 aa16.31■□□□□ 0.2
SHANK3-203ENST00000445220 SLC25A34Q6PIV7 304 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms